Strain Fitness in Escherichia coli BW25113 around b4174

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
4,399,118	+	hflX	b4173	0.33	-0.2
4,399,140	+	hflX	b4173	0.35	-0.9
4,399,154	+	hflX	b4173	0.36	+0.3
4,399,217	-	hflX	b4173	0.41	+0.1
4,399,307	+	hflX	b4173	0.48	-1.4
4,399,307	+	hflX	b4173	0.48	-1.1
4,399,365	-	hflX	b4173	0.52	+1.0
4,399,365	-	hflX	b4173	0.52	+0.2
4,399,407	+	hflX	b4173	0.56	-0.2
4,399,407	+	hflX	b4173	0.56	+0.3
4,399,421	-	hflX	b4173	0.57	+0.7
4,399,449	-	hflX	b4173	0.59	-0.2
4,399,457	-	hflX	b4173	0.59	-0.1
4,399,457	-	hflX	b4173	0.59	-1.5
4,399,457	-	hflX	b4173	0.59	-0.1
4,399,500	-	hflX	b4173	0.63	-1.2
4,399,500	-	hflX	b4173	0.63	+0.4
4,399,542	+	hflX	b4173	0.66	+0.2
4,399,622	+	hflX	b4173	0.72	-0.8
4,399,691	+	hflX	b4173	0.78	-1.2
4,399,761	+	hflX	b4173	0.83	-1.6
4,399,793	-	hflX	b4173	0.86	-0.3
4,399,804	+	hflX	b4173	0.87	-2.9
4,400,041	+				-0.8
4,400,041	+				-0.7
4,400,043	-				+0.1
4,400,126	+				+1.1
4,400,162	+				+0.6
4,400,162	+				+0.7
4,400,293	-	hflK	b4174	0.18	+0.7
4,400,298	+	hflK	b4174	0.19	+0.2
4,400,298	+	hflK	b4174	0.19	+0.3
4,400,356	+	hflK	b4174	0.23	+0.4
4,400,385	-	hflK	b4174	0.26	+0.7
4,400,385	-	hflK	b4174	0.26	+0.7
4,400,411	+	hflK	b4174	0.28	-1.0
4,400,416	+	hflK	b4174	0.28	+0.5
4,400,416	+	hflK	b4174	0.28	-0.2
4,400,429	-	hflK	b4174	0.29	+0.1
4,400,476	-	hflK	b4174	0.33	+0.6
4,400,502	-	hflK	b4174	0.35	+0.3
4,400,534	-	hflK	b4174	0.38	+0.9
4,400,546	-	hflK	b4174	0.38	+0.5
4,400,555	-	hflK	b4174	0.39	+0.2
4,400,582	+	hflK	b4174	0.41	-1.6
4,400,586	+	hflK	b4174	0.42	+0.3
4,400,586	+	hflK	b4174	0.42	+0.8
4,400,620	-	hflK	b4174	0.44	+0.3
4,400,643	+	hflK	b4174	0.46	+0.6
4,400,654	+	hflK	b4174	0.47	+1.0
4,400,704	-	hflK	b4174	0.51	-0.1
4,400,704	-	hflK	b4174	0.51	-0.3
4,400,709	-	hflK	b4174	0.51	-0.6
4,400,716	+	hflK	b4174	0.52	+0.7
4,400,716	+	hflK	b4174	0.52	+0.3
4,400,747	+	hflK	b4174	0.54	-0.1
4,400,749	+	hflK	b4174	0.55	+0.2
4,400,767	-	hflK	b4174	0.56	+0.8
4,400,779	-	hflK	b4174	0.57	+1.1
4,400,779	-	hflK	b4174	0.57	+0.5
4,400,860	+	hflK	b4174	0.63	+0.0
4,400,875	-	hflK	b4174	0.65	+0.5
4,400,908	-	hflK	b4174	0.67	-0.1
4,400,932	+	hflK	b4174	0.69	-0.1
4,400,933	+	hflK	b4174	0.69	+0.9
4,400,942	+	hflK	b4174	0.70	+0.5
4,400,942	+	hflK	b4174	0.70	+1.3
4,400,942	-	hflK	b4174	0.70	-0.5
4,400,951	-	hflK	b4174	0.71	+0.8
4,400,951	-	hflK	b4174	0.71	+0.2
4,400,952	+	hflK	b4174	0.71	+1.1
4,400,952	+	hflK	b4174	0.71	+0.4
4,400,952	+	hflK	b4174	0.71	+0.5
4,400,966	+	hflK	b4174	0.72	+0.2
4,400,983	+	hflK	b4174	0.73	+0.3
4,400,991	-	hflK	b4174	0.74	+0.4
4,401,008	+	hflK	b4174	0.75	+5.0
4,401,010	-	hflK	b4174	0.75	+0.8
4,401,073	-	hflK	b4174	0.80	+0.8
4,401,091	-	hflK	b4174	0.82	+0.1
4,401,091	-	hflK	b4174	0.82	+0.3
4,401,218	+				-0.5
4,401,238	-				+1.0
4,401,238	-				+0.2
4,401,252	-				+0.0
4,401,259	+				+1.2
4,401,310	+				-0.4
4,401,362	+				-0.0
4,401,368	+				-0.7
4,401,368	+				-0.7
4,401,408	+				-0.3
4,401,408	+				+0.6
4,401,408	+				-1.3
4,401,408	+				+0.3
4,401,426	+	hflC	b4175	0.10	-0.3
4,401,436	+	hflC	b4175	0.11	+0.2
4,401,467	-	hflC	b4175	0.14	-0.4
4,401,526	+	hflC	b4175	0.20	+0.0
4,401,605	-	hflC	b4175	0.28	+0.7
4,401,628	+	hflC	b4175	0.30	+0.4
4,401,639	-	hflC	b4175	0.31	+0.3
4,401,643	-	hflC	b4175	0.32	+0.3
4,401,756	-	hflC	b4175	0.43	-0.0
4,401,764	-	hflC	b4175	0.44	+1.2
4,401,764	-	hflC	b4175	0.44	+0.8
4,401,792	-	hflC	b4175	0.47	+0.5
4,401,792	-	hflC	b4175	0.47	+0.2
4,401,910	+	hflC	b4175	0.58	-0.2
4,401,912	+	hflC	b4175	0.59	-0.0
4,401,912	+	hflC	b4175	0.59	+0.4
4,401,912	+	hflC	b4175	0.59	+1.1
4,401,912	+	hflC	b4175	0.59	-0.2
4,401,920	-	hflC	b4175	0.59	+1.0
4,401,920	-	hflC	b4175	0.59	+0.3
4,401,920	-	hflC	b4175	0.59	+1.1
4,401,920	-	hflC	b4175	0.59	+0.5
4,401,927	+	hflC	b4175	0.60	+0.7
4,401,958	+	hflC	b4175	0.63	+0.8
4,401,986	-	hflC	b4175	0.66	-0.1
4,401,986	-	hflC	b4175	0.66	+0.9
4,401,997	-	hflC	b4175	0.67	+0.4
4,401,997	-	hflC	b4175	0.67	+0.2
4,402,038	+	hflC	b4175	0.71	-0.3
4,402,038	+	hflC	b4175	0.71	-0.6
4,402,126	-	hflC	b4175	0.80	+0.8
4,402,126	-	hflC	b4175	0.80	+0.5
4,402,138	-	hflC	b4175	0.81	+0.0
4,402,166	-	hflC	b4175	0.84	+0.1
4,402,191	-	hflC	b4175	0.86	+0.2
4,402,220	-	hflC	b4175	0.89	+0.3
4,402,220	-	hflC	b4175	0.89	+0.4
4,402,253	-				+0.5
4,402,253	-				+0.4
4,402,258	+				-0.1
4,402,263	-				+0.5
4,402,263	-				+0.8
4,402,263	-				-0.9
4,402,263	-				+1.4