Strain Fitness in Escherichia coli BW25113 around b2955

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
3,094,290	+	yggT	b2952	0.79	-0.5
3,094,319	+	yggT	b2952	0.84	-0.1
3,094,324	+	yggT	b2952	0.85	-0.8
3,094,333	+	yggT	b2952	0.87	-0.1
3,094,333	+	yggT	b2952	0.87	-0.3
3,094,391	-				-0.3
3,094,400	+				+0.1
3,094,400	+				+0.4
3,094,451	+	yggU	b2953	0.16	-0.5
3,094,451	+	yggU	b2953	0.16	+0.2
3,094,542	+	yggU	b2953	0.47	-0.1
3,094,775	+	yggV	b2954	0.12	+0.2
3,094,879	+	yggV	b2954	0.30	-1.8
3,094,920	-	yggV	b2954	0.37	+0.0
3,094,948	+	yggV	b2954	0.41	+0.1
3,095,006	+	yggV	b2954	0.51	-0.1
3,095,095	-	yggV	b2954	0.66	-0.7
3,095,115	+	yggV	b2954	0.69	-0.5
3,095,136	+	yggV	b2954	0.73	-0.8
3,095,299	-				-0.2
3,095,380	+				-0.4
3,095,409	-	yggW	b2955	0.11	-0.3
3,095,442	-	yggW	b2955	0.13	-0.7
3,095,448	+	yggW	b2955	0.14	-0.8
3,095,456	-	yggW	b2955	0.15	-0.8
3,095,485	+	yggW	b2955	0.17	-1.1
3,095,609	-	yggW	b2955	0.28	-0.6
3,095,661	-	yggW	b2955	0.33	-0.2
3,095,757	-	yggW	b2955	0.41	-0.1
3,095,844	-	yggW	b2955	0.49	+0.3
3,095,886	+	yggW	b2955	0.53	-0.6
3,095,902	+	yggW	b2955	0.54	-1.9
3,096,070	-	yggW	b2955	0.69	-0.9
3,096,104	-	yggW	b2955	0.72	+0.1
3,096,146	+	yggW	b2955	0.75	-0.1
3,096,179	-	yggW	b2955	0.78	-0.8
3,096,242	+	yggW	b2955	0.84	-0.3
3,096,242	+	yggW	b2955	0.84	-1.2
3,096,281	-	yggW	b2955	0.87	-1.4
3,096,319	-				-1.4
3,096,319	-				-0.7
3,096,327	+				-0.8
3,096,453	+				+0.1
3,096,550	-				+0.0
3,096,579	-				+0.3
3,096,846	+	yggM	b2956	0.26	-0.4
3,096,847	-	yggM	b2956	0.26	-0.0
3,096,858	+	yggM	b2956	0.28	+0.3
3,096,866	-	yggM	b2956	0.28	+0.3
3,096,866	-	yggM	b2956	0.28	+0.5
3,096,899	-	yggM	b2956	0.32	-0.0
3,097,084	-	yggM	b2956	0.50	-0.1
3,097,107	-	yggM	b2956	0.52	+1.7
3,097,207	-	yggM	b2956	0.62	+0.1
3,097,252	+	yggM	b2956	0.67	+0.2
3,097,252	+	yggM	b2956	0.67	+0.8
3,097,420	-	yggM	b2956	0.83	+0.4
3,097,420	-	yggM	b2956	0.83	+0.4