Strain Fitness in Escherichia coli BW25113 around b2314

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,428,063	+	purF	b2312	0.87	-0.0
2,428,064	-	purF	b2312	0.87	+0.2
2,428,064	-	purF	b2312	0.87	+0.2
2,428,146	-				-0.2
2,428,157	-				-0.9
2,428,194	+				-0.1
2,428,194	+				+0.8
2,428,202	-				+0.5
2,428,202	-				-0.6
2,428,203	-				+0.6
2,428,385	-	cvpA	b2313	0.18	+0.9
2,428,458	-	cvpA	b2313	0.33	+0.4
2,428,510	-	cvpA	b2313	0.44	+0.6
2,428,649	+	cvpA	b2313	0.72	+0.1
2,428,657	-	cvpA	b2313	0.74	+0.5
2,428,657	-	cvpA	b2313	0.74	+0.1
2,428,684	-	cvpA	b2313	0.79	-0.2
2,428,723	+	cvpA	b2313	0.87	+0.4
2,428,775	+				-0.7
2,428,775	+				+0.1
2,428,816	-				+0.3
2,428,818	-				-0.0
2,428,818	-				+1.0
2,428,986	-				-0.2
2,429,015	-				+0.1
2,429,016	+				-0.7
2,429,072	-				-0.0
2,429,111	-	dedD	b2314	0.10	+0.5
2,429,281	-	dedD	b2314	0.36	+0.3
2,429,281	-	dedD	b2314	0.36	+0.0
2,429,287	-	dedD	b2314	0.37	+0.4
2,429,461	-	dedD	b2314	0.63	+1.0
2,429,480	+	dedD	b2314	0.66	+1.2
2,429,596	-	dedD	b2314	0.83	+0.8
2,429,596	-	dedD	b2314	0.83	+0.9
2,429,646	-				+0.2
2,429,646	-				-0.6