Strain Fitness in Escherichia coli BW25113 around b2099

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,177,161	-	yegT	b2098	0.25	+0.7
2,177,165	-	yegT	b2098	0.25	-0.3
2,177,287	+	yegT	b2098	0.35	-0.8
2,177,301	-	yegT	b2098	0.36	+0.4
2,177,359	-	yegT	b2098	0.40	+0.3
2,177,359	-	yegT	b2098	0.40	-1.1
2,177,451	-	yegT	b2098	0.48	-0.4
2,177,521	+	yegT	b2098	0.53	+0.8
2,177,521	+	yegT	b2098	0.53	+0.3
2,177,531	-	yegT	b2098	0.54	-0.5
2,177,790	+	yegT	b2098	0.74	+0.4
2,177,830	+	yegT	b2098	0.77	+0.0
2,177,862	+	yegT	b2098	0.80	+0.5
2,177,873	+	yegT	b2098	0.81	+0.3
2,177,966	+	yegT	b2098	0.88	-0.4
2,177,974	-	yegT	b2098	0.88	+0.3
2,178,144	+				-0.2
2,178,181	+				+0.0
2,178,299	+	yegU	b2099	0.18	-0.4
2,178,381	+	yegU	b2099	0.26	-0.1
2,178,588	-	yegU	b2099	0.47	+0.1
2,178,600	-	yegU	b2099	0.48	+0.9
2,178,717	-	yegU	b2099	0.60	-0.1
2,178,859	+	yegU	b2099	0.74	-0.1
2,178,893	+	yegU	b2099	0.77	+0.8
2,178,893	+	yegU	b2099	0.77	+0.5
2,178,920	+	yegU	b2099	0.80	+0.4
2,179,014	-	yegU	b2099	0.89	+0.3
2,179,214	+				+0.1
2,179,221	-	yegV	b2100	0.11	-0.1
2,179,222	-	yegV	b2100	0.11	-0.5
2,179,310	+	yegV	b2100	0.20	+0.6
2,179,396	-	yegV	b2100	0.29	-0.2
2,179,448	-	yegV	b2100	0.34	+0.1
2,179,906	-	yegV	b2100	0.82	+0.8
2,179,906	-	yegV	b2100	0.82	+0.1
2,179,993	-				+0.1
2,180,103	+				+2.6