Strain Fitness in Escherichia coli BW25113 around b1993

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,062,333	+	cobT	b1991	0.85	+0.8
2,062,333	+	cobT	b1991	0.85	+0.5
2,062,357	-	cobT	b1991	0.88	+0.4
2,062,416	-				-0.6
2,062,704	+	cobS	b1992	0.27	+0.3
2,063,068	+	cobS	b1992	0.76	+0.4
2,063,182	+				+0.2
2,063,182	-				-0.2
2,063,203	-				+0.8
2,063,378	-	cobU	b1993	0.25	-0.1
2,063,378	-	cobU	b1993	0.25	-2.0
2,063,390	+	cobU	b1993	0.27	+0.3
2,063,527	+	cobU	b1993	0.52	+0.0
2,063,705	-	cobU	b1993	0.85	-1.0
2,063,710	+	cobU	b1993	0.86	+0.1
2,063,728	-	cobU	b1993	0.89	-0.3
2,063,728	-	cobU	b1993	0.89	-1.1
2,063,728	-	cobU	b1993	0.89	-2.1
2,063,728	-	cobU	b1993	0.89	-1.3
2,063,764	-				-0.3
2,063,882	-				-1.2
2,063,882	-				-0.8
2,064,082	-				-2.2
2,064,082	-				-1.5
2,064,179	-				+0.4