Strain Fitness in Escherichia coli BW25113 around b1594

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,664,448	+	b1592	b1592	0.88	+0.4
1,664,448	+	b1592	b1592	0.88	-0.3
1,664,579	-				-0.1
1,664,586	+				+0.7
1,664,586	+				-1.3
1,664,976	+	b1593	b1593	0.61	+0.2
1,664,983	+	b1593	b1593	0.62	-0.5
1,664,983	+	b1593	b1593	0.62	+0.9
1,664,991	-	b1593	b1593	0.64	+0.4
1,664,991	-	b1593	b1593	0.64	-1.0
1,664,991	-	b1593	b1593	0.64	+0.1
1,665,407	-				-2.3
1,665,479	-				-0.7
1,665,479	-				-1.2
1,665,479	-				-0.6
1,665,479	-				-1.2
1,665,493	-	dgsA	b1594	0.10	-2.2
1,665,645	-	dgsA	b1594	0.23	-1.2
1,665,645	-	dgsA	b1594	0.23	+0.1
1,665,781	-	dgsA	b1594	0.34	-0.4
1,665,781	-	dgsA	b1594	0.34	-0.7
1,665,898	+	dgsA	b1594	0.43	-0.4
1,665,919	+	dgsA	b1594	0.45	-1.4
1,665,919	+	dgsA	b1594	0.45	-2.1
1,666,141	-	dgsA	b1594	0.63	-2.4
1,666,300	+	dgsA	b1594	0.76	-2.0
1,666,300	+	dgsA	b1594	0.76	-0.7
1,666,471	-				-0.6
1,666,515	-				-1.4
1,666,726	+				+0.9
1,666,726	+				-0.3
1,666,732	-				+0.1
1,666,732	-				+0.9
1,667,012	-	ynfL	b1595	0.32	+0.0
1,667,263	-	ynfL	b1595	0.60	-0.3
1,667,263	-	ynfL	b1595	0.60	+0.3
1,667,440	+	ynfL	b1595	0.80	+0.2
1,667,445	+	ynfL	b1595	0.81	+0.6
1,667,445	+	ynfL	b1595	0.81	+0.4