Strain Fitness in Escherichia coli BW25113 around b1488

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,559,525	-	ddpA	b1487	0.37	+0.3
1,559,596	-	ddpA	b1487	0.41	+0.1
1,559,703	-	ddpA	b1487	0.48	+0.4
1,559,785	-	ddpA	b1487	0.54	+0.3
1,559,785	-	ddpA	b1487	0.54	-0.0
1,560,049	-	ddpA	b1487	0.71	-0.1
1,560,382	-				+1.2
1,560,658	-	ddpX	b1488	0.24	-0.4
1,560,709	+	ddpX	b1488	0.33	-0.6
1,560,869	-	ddpX	b1488	0.60	-0.5
1,560,911	+	ddpX	b1488	0.67	+0.1
1,561,147	-				-0.0
1,561,147	-				-0.1
1,561,159	-				+0.4
1,561,463	-				-0.1
1,561,645	-	b1489	b1489	0.12	-2.4
1,561,695	+	b1489	b1489	0.14	-0.8
1,561,695	+	b1489	b1489	0.14	-0.6
1,561,743	-	b1489	b1489	0.16	-0.9
1,561,808	-	b1489	b1489	0.19	-1.7
1,561,808	-	b1489	b1489	0.19	-1.6