Strain Fitness in Escherichia coli BW25113 around b1349

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,411,223	-				+1.0
1,411,308	-	ydaQ	b1346	0.22	-0.6
1,411,308	-	ydaQ	b1346	0.22	+2.5
1,411,364	+	ydaQ	b1346	0.48	-1.2
1,411,483	+				+1.2
1,411,483	+				-0.6
1,411,534	+				-0.6
1,411,637	-	ydaC	b1347	0.39	+0.2
1,411,696	-	ydaC	b1347	0.67	+2.2
1,411,844	-	lar	b1348	0.45	+1.2
1,411,855	-	lar	b1348	0.50	+1.0
1,411,865	-	lar	b1348	0.55	+0.5
1,411,865	-	lar	b1348	0.55	-0.4
1,411,867	-	lar	b1348	0.56	+0.9
1,411,880	-	lar	b1348	0.63	+1.3
1,411,880	-	lar	b1348	0.63	+0.5
1,412,066	-				+0.5
1,412,069	-				+0.6
1,412,069	-				+0.8
1,412,080	-				+0.6
1,412,090	-	recT	b1349	0.10	+1.0
1,412,103	-	recT	b1349	0.12	+0.9
1,412,103	-	recT	b1349	0.12	+1.4
1,412,113	-	recT	b1349	0.13	+0.7
1,412,192	-	recT	b1349	0.23	+1.3
1,412,213	-	recT	b1349	0.25	+0.4
1,412,213	-	recT	b1349	0.25	+1.1
1,412,235	-	recT	b1349	0.28	+0.9
1,412,302	-	recT	b1349	0.36	+0.5
1,412,302	-	recT	b1349	0.36	+1.1
1,412,538	-	recT	b1349	0.65	-0.1
1,412,896	+				+0.2
1,412,896	+				+0.2
1,412,896	-				+0.9
1,412,896	-				+1.1
1,413,042	+				+0.6
1,413,054	+				+0.9
1,413,054	+				-0.1
1,413,135	+	recE	b1350	0.12	-0.2
1,413,341	+	recE	b1350	0.20	-1.9
1,413,411	+	recE	b1350	0.23	+0.4
1,413,411	+	recE	b1350	0.23	+0.7
1,413,755	-	recE	b1350	0.36	+0.5
1,413,755	-	recE	b1350	0.36	+0.8