Strain Fitness in Escherichia coli BW25113 around b1329

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,390,259	+	ycjZ	b1328	0.27	-0.7
1,390,302	+	ycjZ	b1328	0.32	+0.2
1,390,320	-	ycjZ	b1328	0.34	-0.8
1,390,349	-	ycjZ	b1328	0.37	+0.7
1,390,572	+	ycjZ	b1328	0.62	-0.1
1,390,572	+	ycjZ	b1328	0.62	+0.2
1,390,604	+	ycjZ	b1328	0.65	+0.1
1,390,636	+	ycjZ	b1328	0.69	+0.9
1,390,636	+	ycjZ	b1328	0.69	+1.6
1,390,641	-	ycjZ	b1328	0.70	+2.2
1,390,642	-	ycjZ	b1328	0.70	+0.2
1,390,644	+	ycjZ	b1328	0.70	+0.3
1,390,644	+	ycjZ	b1328	0.70	+0.5
1,390,644	+	ycjZ	b1328	0.70	+1.7
1,390,686	+	ycjZ	b1328	0.75	+2.0
1,390,723	-	ycjZ	b1328	0.79	+3.2
1,390,732	+	ycjZ	b1328	0.80	+0.3
1,390,767	+	ycjZ	b1328	0.84	+0.6
1,390,823	-	ycjZ	b1328	0.90	+2.2
1,390,831	+				+0.1
1,390,831	+				+0.0
1,390,831	+				-0.2
1,390,831	+				+1.1
1,390,839	-				+0.2
1,390,850	+				+0.8
1,390,872	+				-0.5
1,390,896	+				-0.4
1,390,896	+				+1.2
1,391,021	-				-0.4
1,391,037	+				-1.2
1,391,064	+				+1.1
1,391,066	-				+1.1
1,391,066	-				-1.7
1,391,110	-				+1.2
1,391,248	+				+0.4
1,391,347	-				+0.2
1,391,347	-				+1.1
1,391,424	+	b1329	b1329	0.11	+0.6
1,391,424	+	b1329	b1329	0.11	+0.7
1,391,972	-	b1329	b1329	0.45	+0.5
1,392,009	+	b1329	b1329	0.47	+1.0
1,392,099	+	b1329	b1329	0.53	+1.5
1,392,099	+	b1329	b1329	0.53	+2.9
1,392,107	-	b1329	b1329	0.53	-0.1
1,392,107	-	b1329	b1329	0.53	+0.6
1,392,133	-	b1329	b1329	0.55	+0.8
1,392,186	-	b1329	b1329	0.58	+1.4
1,392,197	-	b1329	b1329	0.59	+1.1
1,392,203	+	b1329	b1329	0.59	-0.3
1,392,205	-	b1329	b1329	0.59	-0.9
1,392,211	-	b1329	b1329	0.59	+0.5
1,392,234	-	b1329	b1329	0.61	+1.1
1,392,255	+	b1329	b1329	0.62	+0.1
1,392,263	+	b1329	b1329	0.63	+0.7
1,392,295	+	b1329	b1329	0.65	-0.2
1,392,317	+	b1329	b1329	0.66	+0.8
1,392,317	+	b1329	b1329	0.66	+0.8
1,392,440	+	b1329	b1329	0.74	+1.0
1,392,511	+	b1329	b1329	0.78	-0.0
1,392,549	+	b1329	b1329	0.80	+0.5
1,392,549	+	b1329	b1329	0.80	+1.5
1,392,558	+	b1329	b1329	0.81	+0.6
1,392,558	+	b1329	b1329	0.81	+0.5
1,392,558	+	b1329	b1329	0.81	+0.9
1,392,650	+	b1329	b1329	0.87	+1.3
1,392,674	-	b1329	b1329	0.88	+2.2
1,392,734	+				+0.6
1,392,734	+				-0.2
1,392,806	-				+0.8
1,392,837	-				+0.4
1,392,846	+				+0.6
1,392,853	-				+0.9
1,392,866	-				+0.5
1,392,873	+				-0.4
1,392,882	+				+2.2
1,392,884	+				+2.2
1,392,887	+				+3.2
1,392,892	-				+0.6
1,392,892	-				+2.0
1,392,895	-				+1.2
1,392,895	-				-0.3
1,392,957	-				+0.7
1,392,964	-				+1.3
1,392,971	-				-1.0
1,392,985	+				-1.0
1,392,985	+				+0.3
1,392,985	+				+1.2
1,392,993	-				+0.0
1,393,040	+	ynaI	b1330	0.12	-0.5
1,393,048	+	ynaI	b1330	0.13	-1.6
1,393,048	+	ynaI	b1330	0.13	-0.6
1,393,049	-	ynaI	b1330	0.13	+0.2
1,393,051	-	ynaI	b1330	0.13	-0.1
1,393,140	+	ynaI	b1330	0.22	+0.3
1,393,175	-	ynaI	b1330	0.25	+1.2
1,393,245	-	ynaI	b1330	0.32	-0.3
1,393,256	+	ynaI	b1330	0.33	+1.6
1,393,265	+	ynaI	b1330	0.34	+2.2
1,393,522	-	ynaI	b1330	0.59	+2.0
1,393,522	-	ynaI	b1330	0.59	+1.5
1,393,537	-	ynaI	b1330	0.60	+1.7
1,393,537	-	ynaI	b1330	0.60	+0.3
1,393,613	+	ynaI	b1330	0.68	-0.4
1,393,617	-	ynaI	b1330	0.68	+0.6
1,393,783	-	ynaI	b1330	0.84	-0.4