Strain Fitness in Escherichia coli BW25113 around b1189

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,235,815	-	ycgB	b1188	0.58	-4.8
1,235,815	-	ycgB	b1188	0.58	-2.0
1,236,122	+	ycgB	b1188	0.78	-1.8
1,236,187	-	ycgB	b1188	0.82	-2.2
1,236,339	-				-3.0
1,236,345	-				-2.3
1,236,374	+				-4.4
1,236,374	+				-2.8
1,236,414	-				-1.3
1,236,456	-				-2.1
1,236,788	-				-0.0
1,236,788	-				+0.4
1,236,803	+				-0.5
1,236,924	-	dadA	b1189	0.10	+0.0
1,237,037	+	dadA	b1189	0.19	+0.3
1,237,040	-	dadA	b1189	0.19	+0.6
1,237,146	+	dadA	b1189	0.27	+0.4
1,237,180	+	dadA	b1189	0.30	+0.3
1,237,213	+	dadA	b1189	0.32	-0.2
1,237,213	+	dadA	b1189	0.32	+1.4
1,237,218	+	dadA	b1189	0.33	+0.4
1,237,507	+	dadA	b1189	0.55	+0.1
1,237,545	-	dadA	b1189	0.58	+0.3
1,237,545	-	dadA	b1189	0.58	+1.4
1,237,803	+	dadA	b1189	0.78	+0.3
1,237,803	+	dadA	b1189	0.78	+0.6
1,238,119	+				+2.5
1,238,119	+				+2.1
1,238,234	-	dadX	b1190	0.12	+1.8
1,238,234	-	dadX	b1190	0.12	+2.3
1,238,275	+	dadX	b1190	0.16	+2.1
1,238,275	+	dadX	b1190	0.16	+2.4
1,238,292	+	dadX	b1190	0.18	+2.1
1,238,803	+	dadX	b1190	0.65	+2.4
1,238,803	+	dadX	b1190	0.65	+2.5
1,238,855	+	dadX	b1190	0.70	+1.9
1,238,874	-	dadX	b1190	0.72	+2.6
1,238,920	-	dadX	b1190	0.76	+2.6
1,238,920	-	dadX	b1190	0.76	+3.9