Strain Fitness in Escherichia coli BW25113 around b0610

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
641,891	-	ybdR	b0608	0.47	-0.1
641,900	-	ybdR	b0608	0.48	+0.1
642,079	+	ybdR	b0608	0.62	-0.2
642,087	-	ybdR	b0608	0.63	-0.1
642,097	-	ybdR	b0608	0.63	+0.3
642,173	+	ybdR	b0608	0.70	-0.6
642,191	+	ybdR	b0608	0.71	+0.2
642,218	+	ybdR	b0608	0.73	+0.9
642,317	-	ybdR	b0608	0.81	+0.5
642,412	+	ybdR	b0608	0.89	+0.9
642,665	+				+0.1
642,665	+				-0.3
642,747	-				+0.7
642,750	-				+0.4
642,750	-				-0.1
642,784	+				+0.8
642,785	-				+0.2
642,890	+	rnk	b0610	0.27	+0.6
642,922	+	rnk	b0610	0.35	+0.6
643,290	-				-0.7
643,339	+				-0.0
643,347	-				-1.5
643,530	+	rna	b0611	0.14	-0.2
643,726	-	rna	b0611	0.38	-0.5
643,817	+	rna	b0611	0.49	-0.4
643,950	-	rna	b0611	0.66	-0.9
643,967	+	rna	b0611	0.68	+0.6
644,107	+	rna	b0611	0.85	-0.4
644,115	-	rna	b0611	0.86	-0.8
644,115	-	rna	b0611	0.86	+0.8
644,115	-	rna	b0611	0.86	+0.0