Strain Fitness in Escherichia coli BW25113 around b0113

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
121,095	-	aroP	b0112	0.67	-0.3
121,128	-	aroP	b0112	0.69	-0.9
121,128	-	aroP	b0112	0.69	-0.5
121,146	-	aroP	b0112	0.70	+0.2
121,146	-	aroP	b0112	0.70	-0.5
121,266	-	aroP	b0112	0.79	-0.5
121,266	-	aroP	b0112	0.79	-0.8
121,335	-	aroP	b0112	0.84	-0.2
121,374	-	aroP	b0112	0.87	+0.0
121,374	-	aroP	b0112	0.87	-0.3
121,431	+				-0.4
121,431	+				-0.5
121,458	-				-0.6
121,469	-				+0.2
121,514	+				+0.5
121,531	-				-0.8
121,716	-				-0.1
121,716	-				+0.1
121,723	-				+0.2
121,723	-				+0.7
121,738	-				+0.2
122,355	+	pdhR	b0113	0.34	-4.1
122,358	+	pdhR	b0113	0.35	-4.9
122,369	+	pdhR	b0113	0.36	-2.5
122,416	+	pdhR	b0113	0.42	-4.0
122,442	+	pdhR	b0113	0.46	-3.1
122,471	+	pdhR	b0113	0.50	-5.1
122,489	+	pdhR	b0113	0.52	-3.6
122,489	+	pdhR	b0113	0.52	-1.6
122,489	+	pdhR	b0113	0.52	-3.9
122,500	+	pdhR	b0113	0.53	-1.9
122,537	+	pdhR	b0113	0.58	-5.3
122,814	+				-2.9
123,002	+				+3.4