Strain Fitness in Escherichia coli BW25113 around b4520

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
1,217,360	-	b1168	b1168	0.53	+1.0
1,217,640	-	b1168	b1168	0.71	-0.8
1,217,667	-	b1168	b1168	0.73	+1.2
1,217,690	-	b1168	b1168	0.75	+1.6
1,217,692	-	b1168	b1168	0.75	-1.2
1,217,764	+	b1168	b1168	0.80	+2.0
1,217,764	+	b1168	b1168	0.80	-0.3
1,217,767	-	b1168	b1168	0.80	+2.0
1,217,856	-	b1168	b1168	0.86	+2.0
1,217,861	-	b1168	b1168	0.86	-0.4
1,217,891	-	b1168	b1168	0.88	+1.0
1,217,891	-	b1168	b1168	0.88	+2.0
1,217,891	-	b1168	b1168	0.88	+2.0
1,218,016	+				+2.0
1,218,089	+				-1.4
1,218,096	+				+0.5
1,218,242	-	ymgF	b4520	0.16	+0.6
1,218,284	-	ymgF	b4520	0.36	+1.0
1,218,286	-	ymgF	b4520	0.37	+0.6
1,218,301	+	ymgF	b4520	0.43	+2.0
1,218,309	-	ymgF	b4520	0.47	+1.0
1,218,311	+	ymgF	b4520	0.48	+1.3
1,218,405	+				-0.2
1,218,414	-				-1.3
1,218,446	+				+2.0
1,218,450	-				-0.7
1,218,450	-				-1.9
1,218,454	-				+0.3
1,218,454	-				-0.0
1,218,468	-				+4.3
1,218,472	-				+4.0
1,218,478	+				+1.0
1,218,523	+				+3.0