Strain Fitness in Escherichia coli BW25113 around b4380

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
4,612,558	-				-0.0
4,612,630	+				-0.1
4,612,642	+				+0.7
4,612,659	-				+0.7
4,612,740	-				-0.3
4,612,740	-				-0.2
4,612,747	+				+0.1
4,612,800	-	yjjW	b4379	0.11	-0.3
4,612,811	+	yjjW	b4379	0.12	+0.4
4,612,811	+	yjjW	b4379	0.12	+0.5
4,612,822	-	yjjW	b4379	0.14	+0.4
4,612,822	-	yjjW	b4379	0.14	+0.1
4,612,905	-	yjjW	b4379	0.23	+0.0
4,612,915	+	yjjW	b4379	0.25	+0.2
4,612,923	-	yjjW	b4379	0.25	-0.1
4,612,932	-	yjjW	b4379	0.27	+0.1
4,612,990	+	yjjW	b4379	0.33	+0.2
4,613,060	+	yjjW	b4379	0.41	+0.1
4,613,077	+	yjjW	b4379	0.43	+0.6
4,613,122	-	yjjW	b4379	0.48	-0.1
4,613,140	+	yjjW	b4379	0.51	+0.3
4,613,140	+	yjjW	b4379	0.51	+0.2
4,613,215	+	yjjW	b4379	0.59	+0.0
4,613,215	+	yjjW	b4379	0.59	+0.3
4,613,253	+	yjjW	b4379	0.64	+0.0
4,613,255	+	yjjW	b4379	0.64	+0.1
4,613,263	-	yjjW	b4379	0.65	+0.1
4,613,314	+	yjjW	b4379	0.71	+0.2
4,613,314	+	yjjW	b4379	0.71	+0.3
4,613,320	-	yjjW	b4379	0.71	-0.1
4,613,325	+	yjjW	b4379	0.72	+0.7
4,613,325	+	yjjW	b4379	0.72	+0.1
4,613,325	+	yjjW	b4379	0.72	+0.2
4,613,325	+	yjjW	b4379	0.72	-0.1
4,613,333	-	yjjW	b4379	0.73	-0.9
4,613,333	-	yjjW	b4379	0.73	+0.0
4,613,397	-	yjjW	b4379	0.80	+0.3
4,613,413	+	yjjW	b4379	0.82	+0.6
4,613,416	-	yjjW	b4379	0.83	-0.0
4,613,420	+	yjjW	b4379	0.83	-0.2
4,613,422	+	yjjW	b4379	0.83	-0.2
4,613,470	+	yjjW	b4379	0.89	+0.1
4,613,551	-				-0.1
4,613,643	-				+0.5
4,613,687	+				-0.5
4,613,687	+				+0.5
4,613,703	-	yjjI	b4380	0.11	+0.5
4,613,711	+	yjjI	b4380	0.11	-0.3
4,613,871	+	yjjI	b4380	0.21	-0.1
4,613,871	+	yjjI	b4380	0.21	+0.9
4,613,888	+	yjjI	b4380	0.23	-0.3
4,613,924	+	yjjI	b4380	0.25	-0.2
4,613,936	+	yjjI	b4380	0.26	+0.5
4,613,952	+	yjjI	b4380	0.27	-0.6
4,614,070	-	yjjI	b4380	0.34	+0.4
4,614,070	-	yjjI	b4380	0.34	+0.0
4,614,102	+	yjjI	b4380	0.36	+0.7
4,614,132	-	yjjI	b4380	0.38	-0.3
4,614,257	+	yjjI	b4380	0.46	+1.0
4,614,262	+	yjjI	b4380	0.47	+1.4
4,614,262	+	yjjI	b4380	0.47	+0.5
4,614,329	+	yjjI	b4380	0.51	+1.7
4,614,334	+	yjjI	b4380	0.51	+0.4
4,614,382	-	yjjI	b4380	0.54	+0.5
4,614,382	-	yjjI	b4380	0.54	+0.9
4,614,386	+	yjjI	b4380	0.55	+2.5
4,614,386	+	yjjI	b4380	0.55	+1.7
4,614,455	+	yjjI	b4380	0.59	+2.2
4,614,642	-	yjjI	b4380	0.71	+1.5
4,614,728	+	yjjI	b4380	0.77	+2.5
4,614,728	+	yjjI	b4380	0.77	+2.1
4,614,728	+	yjjI	b4380	0.77	+2.0
4,614,757	-	yjjI	b4380	0.79	+1.0
4,614,757	-	yjjI	b4380	0.79	+1.9
4,614,761	+	yjjI	b4380	0.79	+2.0
4,614,766	-	yjjI	b4380	0.79	+1.6
4,614,769	-	yjjI	b4380	0.79	+1.8
4,614,769	-	yjjI	b4380	0.79	+1.4
4,614,918	+	yjjI	b4380	0.89	+2.0
4,614,918	+				+1.7
4,615,054	+				+1.8
4,615,054	+				+1.8
4,615,213	+				+2.2
4,615,213	+				+2.3
4,615,233	+				+1.7
4,615,261	+				+2.4
4,615,403	-				+0.5
4,615,505	-	deoC	b4381	0.20	+0.7
4,615,505	-	deoC	b4381	0.20	+0.7
4,615,724	-	deoC	b4381	0.48	+0.8
4,615,727	-	deoC	b4381	0.49	+1.6
4,615,734	-	deoC	b4381	0.50	+0.9
4,615,750	+	deoC	b4381	0.52	+2.6
4,615,829	+	deoC	b4381	0.62	+2.4
4,615,829	+	deoC	b4381	0.62	+2.3
4,615,837	-	deoC	b4381	0.63	+0.8
4,616,063	+				+2.6