Strain Fitness in Escherichia coli BW25113 around b4013

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
4,211,358	-	yjaA	b4011	0.26	-0.5
4,211,358	-	yjaA	b4011	0.26	+0.3
4,211,402	+	yjaA	b4011	0.38	+0.1
4,211,605	-				-0.4
4,211,659	-				+0.2
4,211,767	-	yjaB	b4012	0.14	+0.1
4,211,973	+	yjaB	b4012	0.61	+0.1
4,211,994	-	yjaB	b4012	0.66	-0.3
4,211,994	-	yjaB	b4012	0.66	+0.0
4,212,254	-				-0.2
4,212,689	-	metA	b4013	0.42	-5.6
4,212,908	-	metA	b4013	0.65	-4.7
4,212,908	-	metA	b4013	0.65	-3.5
4,212,957	+	metA	b4013	0.70	-5.0
4,213,008	+	metA	b4013	0.76	-3.9
4,213,008	+	metA	b4013	0.76	-6.3
4,213,008	+	metA	b4013	0.76	-4.5
4,213,061	-	metA	b4013	0.82	-3.5
4,213,068	+	metA	b4013	0.82	-5.0
4,213,201	+				+1.2
4,213,491	+				+0.2
4,213,648	+				+0.5
4,213,765	-	aceB	b4014	0.16	+0.4
4,213,777	+	aceB	b4014	0.17	+0.5
4,213,777	+	aceB	b4014	0.17	-0.1
4,213,976	+	aceB	b4014	0.30	-0.0
4,214,093	+	aceB	b4014	0.37	+0.3
4,214,104	+	aceB	b4014	0.38	-0.0
4,214,109	+	aceB	b4014	0.38	+0.4
4,214,182	+	aceB	b4014	0.43	+0.7
4,214,190	-	aceB	b4014	0.43	+0.1