Strain Fitness in Escherichia coli BW25113 around b2946

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
3,088,350	+				-0.9
3,088,350	+				-2.3
3,088,406	-				+0.5
3,088,406	-				+0.1
3,088,453	+	endA	b2945	0.12	-0.2
3,088,619	-	endA	b2945	0.35	-0.2
3,088,683	-	endA	b2945	0.44	+0.1
3,088,724	+	endA	b2945	0.50	+0.1
3,088,732	-	endA	b2945	0.51	-0.5
3,088,732	-	endA	b2945	0.51	-0.4
3,088,875	-	endA	b2945	0.71	+0.0
3,088,885	-	endA	b2945	0.73	-0.2
3,088,962	+	endA	b2945	0.84	-0.3
3,088,962	+	endA	b2945	0.84	-0.7
3,088,962	+	endA	b2945	0.84	-0.6
3,088,970	-	endA	b2945	0.85	+0.5
3,088,970	-	endA	b2945	0.85	-0.0
3,089,020	-				+0.0
3,089,038	-				-0.1
3,089,038	-				-0.1
3,089,038	-				+0.3
3,089,191	+				+0.5
3,089,281	-	yggJ	b2946	0.17	+0.8
3,089,295	-	yggJ	b2946	0.19	+0.9
3,089,411	+	yggJ	b2946	0.35	-0.2
3,089,476	-	yggJ	b2946	0.44	+0.9
3,089,476	-	yggJ	b2946	0.44	+0.6
3,089,586	-	yggJ	b2946	0.59	+1.6
3,089,586	-	yggJ	b2946	0.59	+0.6
3,089,634	+	yggJ	b2946	0.65	+0.3
3,089,634	+	yggJ	b2946	0.65	+0.3
3,089,642	-	yggJ	b2946	0.66	-0.1
3,089,642	-	yggJ	b2946	0.66	-0.5
3,089,895	+				+1.4
3,089,924	-				+2.9
3,090,004	+	gshB	b2947	0.11	+3.3
3,090,085	-	gshB	b2947	0.19	+2.8
3,090,085	-	gshB	b2947	0.19	+2.5
3,090,092	-	gshB	b2947	0.20	+2.7
3,090,222	+	gshB	b2947	0.34	+2.5
3,090,458	-	gshB	b2947	0.59	+3.4
3,090,479	-	gshB	b2947	0.61	+2.6
3,090,479	-	gshB	b2947	0.61	+2.6
3,090,486	-	gshB	b2947	0.62	+2.7
3,090,562	-	gshB	b2947	0.70	+3.0
3,090,562	-	gshB	b2947	0.70	+2.7
3,090,576	+	gshB	b2947	0.71	+2.0
3,090,811	+				+1.7
3,090,847	-				+3.0
3,090,847	-				+2.1
3,090,883	+				-1.1
3,090,883	+				-1.7