Strain Fitness in Escherichia coli BW25113 around b2572

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,705,783	-				+0.3
2,705,783	-				-0.4
2,705,814	-				-0.2
2,705,915	+				-0.4
2,705,915	+				-0.5
2,705,923	-	rseB	b2571	0.11	+0.2
2,705,987	-	rseB	b2571	0.17	-0.2
2,706,013	+	rseB	b2571	0.20	-0.3
2,706,190	-	rseB	b2571	0.39	+0.4
2,706,190	-	rseB	b2571	0.39	+0.3
2,706,211	-	rseB	b2571	0.41	-0.6
2,706,307	+	rseB	b2571	0.51	-0.1
2,706,315	-	rseB	b2571	0.52	+0.5
2,706,315	-	rseB	b2571	0.52	+0.5
2,706,322	+	rseB	b2571	0.52	+0.4
2,706,397	-	rseB	b2571	0.60	-0.0
2,706,399	+	rseB	b2571	0.61	-0.1
2,706,524	+	rseB	b2571	0.74	+0.7
2,706,524	+	rseB	b2571	0.74	+0.0
2,706,576	+	rseB	b2571	0.79	+0.1
2,706,601	+	rseB	b2571	0.82	+0.1
2,706,601	+	rseB	b2571	0.82	-1.1
2,706,654	+	rseB	b2571	0.87	+0.1
2,706,696	+				+0.1
2,706,711	-				-0.0
2,706,711	-				-0.1
2,706,724	-				-0.3
2,706,738	+				+0.0
2,706,754	-				+0.0
2,706,754	-				-0.5
2,706,822	-				-0.3
2,706,822	-				+0.5
2,706,857	-	rseA	b2572	0.12	-0.3
2,706,857	-	rseA	b2572	0.12	-0.1
2,706,857	-	rseA	b2572	0.12	-0.1
2,706,867	-	rseA	b2572	0.14	+0.6
2,706,867	-	rseA	b2572	0.14	+1.7
2,706,909	-	rseA	b2572	0.20	+0.9
2,706,909	-	rseA	b2572	0.20	+0.6
2,706,945	-	rseA	b2572	0.26	-1.3
2,707,085	-	rseA	b2572	0.47	+1.0
2,707,102	-	rseA	b2572	0.50	+2.0
2,707,183	+	rseA	b2572	0.63	-2.3
2,707,254	+	rseA	b2572	0.73	+2.7
2,707,254	+	rseA	b2572	0.73	+1.2
2,707,426	-				+0.2
2,707,436	-				-0.1
2,707,436	-				-0.3
2,707,437	-				+0.1
2,707,440	+				-2.0
2,708,179	-				+0.4
2,708,179	-				-0.0
2,708,218	-				-0.1
2,708,218	-				+0.3
2,708,221	+				+0.6
2,708,239	-				-0.1
2,708,289	+				+0.3
2,708,289	+				-0.1
2,708,309	-				-0.1
2,708,401	-				-0.0
2,708,406	-				-0.4
2,708,406	-				-0.4
2,708,411	-				-0.4