Strain Fitness in Escherichia coli BW25113 around b2316
Experiment: Ying_Nucleobase14 rep A; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Nucleobase14 rep A; time point 2 |
---|---|---|---|---|---|
remove | |||||
2,430,901 | - | -1.1 | |||
2,430,958 | - | -2.9 | |||
2,430,998 | - | -0.4 | |||
2,430,998 | - | -0.2 | |||
2,431,014 | - | -0.8 | |||
2,431,015 | - | -0.0 | |||
2,431,015 | - | +0.2 | |||
2,431,016 | - | +0.5 | |||
2,432,025 | - | -0.2 | |||
2,432,025 | - | -0.3 | |||
2,432,196 | + | dedA | b2317 | 0.14 | -1.1 |
2,432,269 | - | dedA | b2317 | 0.25 | -0.0 |
2,432,269 | - | dedA | b2317 | 0.25 | +0.3 |
2,432,290 | - | dedA | b2317 | 0.28 | +0.3 |
2,432,290 | - | dedA | b2317 | 0.28 | +0.5 |
2,432,494 | + | dedA | b2317 | 0.59 | +0.3 |
2,432,650 | + | dedA | b2317 | 0.83 | -0.8 |
2,432,650 | + | dedA | b2317 | 0.83 | +0.2 |
2,432,800 | + | +0.9 | |||
2,432,808 | - | +0.3 | |||
2,432,808 | - | +0.5 |
Or see this region's nucleotide sequence