Strain Fitness in Escherichia coli BW25113 around b1514

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
1,600,439	+	lsrA	b1513	0.60	+0.4
1,600,518	+	lsrA	b1513	0.65	+0.6
1,600,666	-	lsrA	b1513	0.75	+0.3
1,600,952	+				+0.4
1,601,276	-	lsrC	b1514	0.23	+0.6
1,601,423	+	lsrC	b1514	0.37	+0.4
1,601,423	+	lsrC	b1514	0.37	+0.6
1,601,973	+				-0.6
1,602,085	+				-0.2
1,602,439	+	lsrD	b1515	0.37	-0.0
1,602,445	-	lsrD	b1515	0.38	+0.2
1,602,445	-	lsrD	b1515	0.38	+0.7
1,602,938	+	lsrD	b1515	0.87	-0.3
1,602,946	+	lsrD	b1515	0.88	+0.3
1,603,065	-				-0.0