Strain Fitness in Escherichia coli BW25113 around b1513

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
1,598,582	+	lsrR	b1512	0.28	-0.1
1,598,950	+	lsrR	b1512	0.67	+0.8
1,598,950	+	lsrR	b1512	0.67	+0.7
1,598,997	-	lsrR	b1512	0.72	-0.5
1,599,098	-	lsrR	b1512	0.82	+0.8
1,599,110	-	lsrR	b1512	0.84	-0.6
1,599,478	+				-0.1
1,599,478	+				+0.0
1,599,628	+				+0.1
1,599,697	-	lsrA	b1513	0.12	+0.2
1,599,697	-	lsrA	b1513	0.12	+0.6
1,599,928	-	lsrA	b1513	0.27	+1.0
1,599,928	-	lsrA	b1513	0.27	+0.5
1,600,439	+	lsrA	b1513	0.60	+0.4
1,600,518	+	lsrA	b1513	0.65	+0.6
1,600,666	-	lsrA	b1513	0.75	+0.3
1,600,952	+				+0.4
1,601,276	-	lsrC	b1514	0.23	+0.6
1,601,423	+	lsrC	b1514	0.37	+0.4
1,601,423	+	lsrC	b1514	0.37	+0.6
1,601,973	+				-0.6