Strain Fitness in Escherichia coli BW25113 around b1284

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
1,340,691	+				+0.2
1,340,708	-				+0.2
1,340,708	-				-0.6
1,340,748	+	yciH	b1282	0.20	-0.3
1,340,781	-	yciH	b1282	0.30	-0.6
1,340,902	+	yciH	b1282	0.67	-0.2
1,340,937	+	yciH	b1282	0.78	-0.3
1,340,940	+	yciH	b1282	0.79	-0.2
1,340,986	+				+0.4
1,341,128	-				-0.2
1,341,179	-	osmB	b1283	0.21	-0.1
1,341,179	-	osmB	b1283	0.21	+0.6
1,341,187	-	osmB	b1283	0.24	-0.3
1,341,191	-	osmB	b1283	0.26	+0.5
1,341,191	-	osmB	b1283	0.26	+0.1
1,341,191	-	osmB	b1283	0.26	-1.1
1,341,203	-	osmB	b1283	0.32	+0.0
1,341,211	+	osmB	b1283	0.35	+0.9
1,341,214	-	osmB	b1283	0.37	+0.7
1,341,214	-	osmB	b1283	0.37	+0.3
1,341,214	-	osmB	b1283	0.37	+0.4
1,341,214	-	osmB	b1283	0.37	+0.4
1,341,214	-	osmB	b1283	0.37	+0.1
1,341,214	-	osmB	b1283	0.37	-0.8
1,341,219	-	osmB	b1283	0.39	-0.2
1,341,219	-	osmB	b1283	0.39	-0.2
1,341,219	-	osmB	b1283	0.39	+0.7
1,341,219	-	osmB	b1283	0.39	-2.8
1,341,219	-	osmB	b1283	0.39	+0.0
1,341,223	-	osmB	b1283	0.41	-0.0
1,341,229	-	osmB	b1283	0.43	+0.2
1,341,274	+	osmB	b1283	0.64	-0.1
1,341,274	+	osmB	b1283	0.64	+0.9
1,341,282	-	osmB	b1283	0.68	-0.5
1,341,288	+	osmB	b1283	0.70	+1.9
1,341,293	-	osmB	b1283	0.73	+0.0
1,341,296	-	osmB	b1283	0.74	-0.4
1,341,296	-	osmB	b1283	0.74	+0.2
1,341,296	-	osmB	b1283	0.74	+0.8
1,341,296	-	osmB	b1283	0.74	-0.0
1,341,369	-				+0.9
1,341,369	-				+0.1
1,341,400	-				+0.1
1,341,421	-				+0.3
1,341,459	-				+0.5
1,341,465	-				+0.1
1,341,473	-				+0.5
1,341,473	-				-0.3
1,341,483	-				-0.3
1,341,494	-				-0.4
1,341,495	-				+0.7
1,341,495	-				-1.3
1,341,543	-				+0.5
1,341,585	-				+0.6
1,341,585	-				-0.0
1,341,609	-				-0.1
1,341,632	-				+0.8
1,341,645	-				+0.2
1,341,654	+				-1.7
1,341,654	+				+0.8
1,341,656	+				+0.9
1,341,719	+	yciT	b1284	0.13	+0.8
1,341,719	+	yciT	b1284	0.13	+0.9
1,341,725	-	yciT	b1284	0.14	+0.3
1,341,768	+	yciT	b1284	0.20	+0.9
1,341,823	-	yciT	b1284	0.27	+0.8
1,342,104	+	yciT	b1284	0.64	+0.7
1,342,104	+	yciT	b1284	0.64	+0.7
1,342,216	-	yciT	b1284	0.79	+1.1
1,342,306	-				+0.5
1,342,313	+				+0.7
1,342,313	+				+0.2
1,342,329	+				+0.4
1,342,478	+	yciZ	b4596	0.10	+0.5
1,342,478	+	yciZ	b4596	0.10	+1.1
1,342,708	-				+0.5
1,342,809	-				-3.2
1,343,191	-	gmr	b1285	0.21	-1.5
1,343,224	+	gmr	b1285	0.22	-1.1
1,343,224	+	gmr	b1285	0.22	-2.4
1,343,235	+	gmr	b1285	0.23	-2.3