Strain Fitness in Escherichia coli BW25113 around b1136

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
1,193,439	-	ymfB	b1134	0.84	-0.1
1,193,469	+				-0.2
1,193,558	-				-0.5
1,193,669	-	ymfC	b1135	0.23	+0.0
1,193,697	-	ymfC	b1135	0.27	+0.2
1,193,774	-	ymfC	b1135	0.39	-0.7
1,193,778	+	ymfC	b1135	0.39	+0.0
1,193,780	-	ymfC	b1135	0.40	-0.1
1,193,825	+	ymfC	b1135	0.46	+0.5
1,193,886	-	ymfC	b1135	0.56	-0.3
1,195,722	-				-0.7
1,195,722	-				-0.2
1,195,729	+				-0.2
1,195,735	+				+0.0
1,195,740	+				-0.9
1,195,740	+				+0.1
1,195,740	+				+0.2
1,195,741	+				+0.1
1,195,746	-				+0.3
1,195,749	+				-0.2
1,195,760	+				-0.5
1,195,807	+				-0.3
1,195,888	+				+0.1
1,195,894	-				+0.5
1,195,894	-				-0.1
1,195,894	-				+0.4
1,195,895	-				-0.0
1,195,895	-				-0.2
1,195,896	-				+0.7
1,195,896	-				+3.0
1,195,896	-				+1.8
1,195,932	+				-0.4
1,195,932	+				+0.2
1,195,938	-				-0.2
1,195,941	-				-0.0
1,195,944	+				+0.3
1,195,944	+				+0.3
1,195,954	+				+0.5
1,195,957	-				-0.5
1,195,961	-				+0.9
1,195,963	-				+0.6
1,195,972	-				-0.3
1,195,982	-				-0.0
1,195,985	+				+0.1
1,196,004	-				+0.3
1,196,045	+				+2.0
1,196,045	+				+0.6
1,196,054	+				+1.0
1,196,105	-				-1.9
1,196,127	-				+1.4