Strain Fitness in Escherichia coli BW25113 around b0888

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
930,352	+				-3.1
930,373	-				-1.5
930,373	-				-3.2
930,410	+	trxB	b0888	0.11	-2.6
930,456	-	trxB	b0888	0.15	-2.6
930,458	+	trxB	b0888	0.16	-2.2
930,554	-	trxB	b0888	0.25	-2.5
930,610	-	trxB	b0888	0.31	-3.8
930,612	+	trxB	b0888	0.31	-2.2
930,634	-				-1.6
930,848	-	trxB	b0888	0.56	-1.2
930,848	-	trxB	b0888	0.56	-2.3
930,863	+	trxB	b0888	0.57	-3.6
930,913	-	trxB	b0888	0.63	-1.5
930,939	+	trxB	b0888	0.65	-2.7
931,019	+	trxB	b0888	0.74	-1.9
931,137	-	trxB	b0888	0.86	-2.8
931,193	-				-1.3
931,215	-				-3.2
931,327	-				+0.1
931,327	-				-1.6
931,379	+				+0.3
931,411	+				-0.5
931,435	+				-0.1
931,641	-				+0.1
931,641	-				+0.5
931,721	-				+0.0
931,764	-				+0.1
931,764	-				-0.3
931,801	+				-0.3
931,856	-				-0.1
931,864	+				-1.3
931,937	+	lrp	b0889	0.24	+0.7
932,002	-	lrp	b0889	0.37	-1.4
932,002	-	lrp	b0889	0.37	+0.5
932,004	-	lrp	b0889	0.38	+0.3
932,066	-	lrp	b0889	0.50	-0.1
932,078	+	lrp	b0889	0.53	-0.3