Strain Fitness in Escherichia coli BW25113 around b4014

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
4,212,689	-	metA	b4013	0.42	-5.5
4,212,908	-	metA	b4013	0.65	-4.6
4,212,908	-	metA	b4013	0.65	-4.4
4,212,957	+	metA	b4013	0.70	-4.8
4,213,008	+	metA	b4013	0.76	-6.6
4,213,008	+	metA	b4013	0.76	-6.2
4,213,008	+	metA	b4013	0.76	-4.4
4,213,061	-	metA	b4013	0.82	-3.3
4,213,068	+	metA	b4013	0.82	-4.9
4,213,201	+				+0.9
4,213,491	+				-0.0
4,213,648	+				+0.4
4,213,765	-	aceB	b4014	0.16	+0.2
4,213,777	+	aceB	b4014	0.17	+0.6
4,213,777	+	aceB	b4014	0.17	+0.5
4,213,976	+	aceB	b4014	0.30	+0.7
4,214,093	+	aceB	b4014	0.37	+0.8
4,214,104	+	aceB	b4014	0.38	+0.0
4,214,109	+	aceB	b4014	0.38	-0.1
4,214,182	+	aceB	b4014	0.43	+0.6
4,214,190	-	aceB	b4014	0.43	+0.9
4,214,244	+	aceB	b4014	0.46	+1.1
4,214,244	+	aceB	b4014	0.46	+0.8
4,214,314	-	aceB	b4014	0.51	+0.5
4,214,527	+	aceB	b4014	0.64	-0.2
4,214,568	+	aceB	b4014	0.67	-0.3
4,214,602	+	aceB	b4014	0.69	+0.2
4,214,621	+	aceB	b4014	0.70	+0.3
4,214,731	+	aceB	b4014	0.77	+0.4
4,214,731	+	aceB	b4014	0.77	-0.2
4,214,751	-	aceB	b4014	0.78	+0.2
4,214,778	+	aceB	b4014	0.80	+0.1
4,215,008	+				-0.5
4,215,037	+				+0.8
4,215,077	+				+0.5
4,215,206	+				-0.1
4,215,214	-				+0.1
4,215,214	-				+0.1
4,215,214	-				-0.0
4,215,214	-				+0.2
4,215,214	-				-1.1
4,215,267	+	aceA	b4015	0.10	+0.2
4,215,454	-	aceA	b4015	0.25	-0.6
4,215,566	+	aceA	b4015	0.33	-1.2
4,215,702	+	aceA	b4015	0.44	-0.7
4,215,736	-	aceA	b4015	0.46	-0.1
4,215,759	+	aceA	b4015	0.48	-0.3
4,215,813	+	aceA	b4015	0.52	-0.0
4,215,878	-	aceA	b4015	0.57	-0.3
4,215,878	-	aceA	b4015	0.57	+0.4
4,215,941	-	aceA	b4015	0.62	+0.1
4,215,965	+	aceA	b4015	0.64	+0.1
4,215,989	-	aceA	b4015	0.66	+0.7
4,215,989	-	aceA	b4015	0.66	-0.2
4,216,035	+	aceA	b4015	0.69	-0.1
4,216,074	+	aceA	b4015	0.72	-0.3
4,216,074	+	aceA	b4015	0.72	-0.2
4,216,082	-	aceA	b4015	0.73	+0.7