Strain Fitness in Escherichia coli BW25113 around b4386

Experiment: Ying_sugar7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 2
4,620,193	-	yjjJ	b4385	0.30	+0.2
4,620,217	+	yjjJ	b4385	0.32	+0.2
4,620,305	-	yjjJ	b4385	0.39	-0.4
4,620,335	-	yjjJ	b4385	0.41	+0.7
4,620,350	-	yjjJ	b4385	0.42	+0.7
4,620,350	-	yjjJ	b4385	0.42	+0.1
4,620,455	-	yjjJ	b4385	0.50	+0.1
4,620,484	-	yjjJ	b4385	0.52	-0.0
4,620,581	-	yjjJ	b4385	0.59	+0.8
4,620,583	+	yjjJ	b4385	0.59	-0.3
4,620,608	-	yjjJ	b4385	0.61	-0.1
4,620,627	-	yjjJ	b4385	0.63	-0.4
4,620,632	-	yjjJ	b4385	0.63	+0.5
4,620,677	+	yjjJ	b4385	0.66	+0.1
4,620,688	+	yjjJ	b4385	0.67	+0.7
4,620,835	-	yjjJ	b4385	0.78	+0.7
4,620,883	-	yjjJ	b4385	0.82	-1.9
4,620,954	+	yjjJ	b4385	0.87	+0.5
4,620,993	+				-0.5
4,621,019	-				-0.1
4,621,117	-				+0.1
4,621,117	-				-0.5
4,621,124	+				-0.0
4,621,128	+				+0.0
4,621,128	+				+0.6
4,621,232	+	lplA	b4386	0.11	+0.5
4,621,240	-	lplA	b4386	0.11	-1.5
4,621,240	-	lplA	b4386	0.11	-0.4
4,621,240	-	lplA	b4386	0.11	+0.3
4,621,287	-	lplA	b4386	0.16	-0.1
4,621,298	+	lplA	b4386	0.17	-2.3
4,621,298	+	lplA	b4386	0.17	-0.1
4,621,301	-	lplA	b4386	0.17	-0.4
4,621,350	-	lplA	b4386	0.22	-0.4
4,621,350	-	lplA	b4386	0.22	-0.6
4,621,457	+	lplA	b4386	0.33	-0.1
4,621,457	+	lplA	b4386	0.33	+0.1
4,621,491	+	lplA	b4386	0.36	+0.0
4,621,501	+	lplA	b4386	0.37	-0.4
4,621,549	+	lplA	b4386	0.42	-0.8
4,621,549	+	lplA	b4386	0.42	-0.3
4,621,592	+	lplA	b4386	0.46	+0.4
4,621,674	-	lplA	b4386	0.54	+0.1
4,621,674	-	lplA	b4386	0.54	+0.0
4,621,869	+	lplA	b4386	0.73	-0.5
4,621,884	-	lplA	b4386	0.75	+0.1
4,621,946	-	lplA	b4386	0.81	+0.6
4,621,946	-	lplA	b4386	0.81	+0.2
4,621,952	-	lplA	b4386	0.81	+0.5
4,621,957	-	lplA	b4386	0.82	-0.0
4,621,970	+	lplA	b4386	0.83	-0.3
4,621,970	+	lplA	b4386	0.83	-0.1
4,621,976	-	lplA	b4386	0.84	-0.5
4,622,011	-	lplA	b4386	0.87	+0.1
4,622,011	-	lplA	b4386	0.87	-0.5
4,622,126	+				+0.8
4,622,281	-	ytjB	b4387	0.18	-0.4
4,622,281	-	ytjB	b4387	0.18	+0.3
4,622,284	-	ytjB	b4387	0.18	-0.2
4,622,284	-	ytjB	b4387	0.18	-1.9
4,622,289	-	ytjB	b4387	0.19	+0.1
4,622,305	+	ytjB	b4387	0.21	+0.2
4,622,531	+	ytjB	b4387	0.56	-0.7
4,622,534	+	ytjB	b4387	0.57	-0.1
4,622,539	-	ytjB	b4387	0.58	+0.1
4,622,539	-	ytjB	b4387	0.58	+0.0
4,622,637	-	ytjB	b4387	0.73	+0.3
4,622,653	+	ytjB	b4387	0.75	+0.0
4,622,705	-	ytjB	b4387	0.83	+0.0
4,622,816	-				+0.0
4,622,846	+				-0.8
4,622,901	+				+0.1
4,622,901	+				-0.6
4,622,925	+				-1.4
4,622,925	+				-4.2
4,622,925	+				-4.7
4,622,944	+				+0.4
4,622,952	-				-4.0
4,622,952	-				-4.4
4,622,977	-				-6.2
4,623,023	+	serB	b4388	0.11	-3.8
4,623,023	-	serB	b4388	0.11	-4.3
4,623,038	+	serB	b4388	0.12	-3.9
4,623,038	+	serB	b4388	0.12	-3.9
4,623,048	+	serB	b4388	0.13	-3.7
4,623,048	+	serB	b4388	0.13	-3.8
4,623,056	-	serB	b4388	0.14	-5.7
4,623,109	-	serB	b4388	0.20	-4.1
4,623,126	-	serB	b4388	0.21	-3.9
4,623,126	-	serB	b4388	0.21	-4.4