Strain Fitness in Escherichia coli BW25113 around b2903

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
3,043,248	-				+0.5
3,043,275	+	ygfF	b2902	0.13	-0.2
3,043,295	-	ygfF	b2902	0.15	-0.5
3,043,423	+	ygfF	b2902	0.33	-0.1
3,043,423	+	ygfF	b2902	0.33	-3.3
3,043,610	-	ygfF	b2902	0.58	+0.4
3,043,610	-	ygfF	b2902	0.58	-0.1
3,043,632	+	ygfF	b2902	0.61	+0.2
3,043,638	-	ygfF	b2902	0.62	+0.2
3,043,658	+	ygfF	b2902	0.64	-1.2
3,043,809	-	ygfF	b2902	0.85	-0.4
3,043,836	-	ygfF	b2902	0.88	-0.3
3,043,903	+				+0.5
3,043,903	+				+0.3
3,043,911	-				+0.2
3,043,911	-				+0.5
3,044,077	-				+0.4
3,044,226	-				+0.4
3,044,282	-				+3.5
3,044,282	-				+3.3
3,044,308	+				+3.7
3,044,317	-				+3.9
3,044,317	-				+3.4
3,044,650	+	gcvP	b2903	0.16	+3.6
3,044,777	+	gcvP	b2903	0.20	+3.9
3,044,785	-	gcvP	b2903	0.21	+3.8
3,044,785	-	gcvP	b2903	0.21	+3.5
3,044,785	-	gcvP	b2903	0.21	+3.6
3,044,788	+	gcvP	b2903	0.21	+3.8
3,044,788	+	gcvP	b2903	0.21	+3.7
3,044,798	-	gcvP	b2903	0.21	+3.7
3,044,831	-	gcvP	b2903	0.22	+3.7
3,045,217	-	gcvP	b2903	0.36	+3.6
3,045,238	+	gcvP	b2903	0.36	+4.0
3,045,239	+	gcvP	b2903	0.36	+3.7
3,045,247	-	gcvP	b2903	0.37	+3.8
3,045,247	-	gcvP	b2903	0.37	+3.8
3,045,247	-	gcvP	b2903	0.37	+3.5
3,045,385	-	gcvP	b2903	0.42	+3.7
3,045,592	-	gcvP	b2903	0.49	+3.7
3,045,595	-	gcvP	b2903	0.49	+3.9
3,045,624	+	gcvP	b2903	0.50	+3.3
3,045,740	-	gcvP	b2903	0.54	+3.7
3,045,775	+	gcvP	b2903	0.55	+3.6
3,045,810	+	gcvP	b2903	0.56	+3.8
3,045,810	+	gcvP	b2903	0.56	+3.8
3,045,863	-	gcvP	b2903	0.58	+3.2
3,045,863	-	gcvP	b2903	0.58	+3.9
3,045,961	+	gcvP	b2903	0.62	+3.6
3,045,961	-	gcvP	b2903	0.62	+3.9
3,045,961	-	gcvP	b2903	0.62	+3.7
3,046,146	+	gcvP	b2903	0.68	+3.5
3,046,167	+	gcvP	b2903	0.69	+3.6
3,046,167	+	gcvP	b2903	0.69	+3.7
3,046,232	-	gcvP	b2903	0.71	+4.0
3,046,281	+	gcvP	b2903	0.73	+3.7
3,046,289	-	gcvP	b2903	0.73	+3.4
3,046,289	-	gcvP	b2903	0.73	+3.6
3,046,305	-	gcvP	b2903	0.74	+3.4
3,046,305	-	gcvP	b2903	0.74	+3.6
3,046,305	-	gcvP	b2903	0.74	+3.9
3,046,305	-	gcvP	b2903	0.74	+3.6
3,046,325	+	gcvP	b2903	0.74	+3.9
3,046,375	+	gcvP	b2903	0.76	+2.9
3,046,636	+	gcvP	b2903	0.85	+3.7
3,046,636	+	gcvP	b2903	0.85	+3.7
3,046,653	-	gcvP	b2903	0.86	+4.0
3,046,659	-	gcvP	b2903	0.86	+5.9
3,046,685	-	gcvP	b2903	0.87	+3.2
3,046,693	+	gcvP	b2903	0.87	+3.4
3,046,693	+	gcvP	b2903	0.87	+3.5
3,046,693	-	gcvP	b2903	0.87	+3.7
3,046,696	-	gcvP	b2903	0.87	+3.6
3,046,706	-	gcvP	b2903	0.88	+3.9
3,046,724	+	gcvP	b2903	0.88	+3.5
3,046,724	+	gcvP	b2903	0.88	+3.8
3,046,733	+	gcvP	b2903	0.88	+3.7
3,046,803	-				+3.6
3,046,848	+				+3.6
3,046,854	-				+4.1
3,046,877	-				+3.6
3,047,124	-				-2.4
3,047,124	-				-1.4
3,047,214	-				-0.1
3,047,214	-				+1.4
3,047,321	+	gcvH	b2904	0.36	+3.7
3,047,321	+	gcvH	b2904	0.36	+3.5
3,047,468	+	gcvH	b2904	0.73	+3.0
3,047,542	+				+3.3
3,047,542	+				+3.7
3,047,684	+				+3.7
3,047,765	+	gcvT	b2905	0.16	+4.3
3,047,796	+	gcvT	b2905	0.18	+4.0
3,047,865	-	gcvT	b2905	0.25	+2.8
3,047,865	-	gcvT	b2905	0.25	+1.8
3,047,871	-	gcvT	b2905	0.25	+2.7
3,047,871	-	gcvT	b2905	0.25	+2.9
3,048,013	+	gcvT	b2905	0.38	+3.7
3,048,057	-	gcvT	b2905	0.42	+2.5