Strain Fitness in Escherichia coli BW25113 around b3964

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
4,158,807	-				-1.7
4,158,821	-				+0.2
4,158,821	-				+0.4
4,158,821	-				+0.1
4,158,823	+				-1.6
4,158,973	+				-0.0
4,158,981	-				+1.1
4,159,070	+				-1.5
4,159,099	+				-0.4
4,159,101	+				+0.2
4,159,157	-				-0.6
4,159,159	-				+0.7
4,159,215	-	fabR	b3963	0.10	+0.8
4,159,220	-	fabR	b3963	0.11	+0.4
4,159,220	-	fabR	b3963	0.11	+0.6
4,159,237	-	fabR	b3963	0.14	+0.6
4,159,237	-	fabR	b3963	0.14	-1.9
4,159,238	+	fabR	b3963	0.14	+0.9
4,159,238	+	fabR	b3963	0.14	-1.6
4,159,278	-	fabR	b3963	0.20	+0.6
4,159,291	-	fabR	b3963	0.22	+0.2
4,159,291	-	fabR	b3963	0.22	+0.3
4,159,321	+	fabR	b3963	0.27	+0.2
4,159,351	+	fabR	b3963	0.31	+1.1
4,159,352	+	fabR	b3963	0.32	-0.2
4,159,354	-	fabR	b3963	0.32	+0.5
4,159,356	+	fabR	b3963	0.32	+0.1
4,159,402	+	fabR	b3963	0.39	+0.7
4,159,402	+	fabR	b3963	0.39	-0.2
4,159,403	+	fabR	b3963	0.40	+0.2
4,159,424	+	fabR	b3963	0.43	+0.6
4,159,445	+	fabR	b3963	0.46	+0.1
4,159,559	+	fabR	b3963	0.64	-0.4
4,159,559	+	fabR	b3963	0.64	+0.5
4,159,629	+	fabR	b3963	0.74	-0.6
4,159,643	-	fabR	b3963	0.77	+0.2
4,159,656	-	fabR	b3963	0.79	-0.1
4,159,697	+	fabR	b3963	0.85	-0.0
4,159,697	+	fabR	b3963	0.85	+0.0
4,159,699	-	fabR	b3963	0.85	+0.7
4,159,699	-	fabR	b3963	0.85	+0.0
4,159,726	+	fabR	b3963	0.89	+0.2
4,159,726	+	fabR	b3963	0.89	+0.2
4,159,734	-				+0.6
4,159,789	+				+0.6
4,159,799	-				+0.1
4,159,811	+				-0.1
4,159,811	+				-0.1
4,159,822	+				+0.5
4,159,822	+				+1.2
4,159,824	-				+1.2
4,159,905	-	yijD	b3964	0.31	+0.4
4,159,932	+	yijD	b3964	0.38	-0.2
4,159,932	+	yijD	b3964	0.38	+0.2
4,159,953	+	yijD	b3964	0.44	-0.5
4,159,954	+	yijD	b3964	0.44	-0.2
4,159,963	+	yijD	b3964	0.47	-0.7
4,159,966	+	yijD	b3964	0.48	-1.2
4,160,019	+	yijD	b3964	0.62	+0.3
4,160,019	+	yijD	b3964	0.62	+0.1
4,160,019	+	yijD	b3964	0.62	-0.5
4,160,019	+	yijD	b3964	0.62	-0.5
4,160,021	+	yijD	b3964	0.63	+0.2
4,160,021	+	yijD	b3964	0.63	-0.3
4,160,021	+	yijD	b3964	0.63	+0.7
4,160,022	+	yijD	b3964	0.63	-0.9
4,160,027	-	yijD	b3964	0.65	-2.0
4,160,027	-	yijD	b3964	0.65	-0.1
4,160,032	-	yijD	b3964	0.66	+1.8
4,160,035	-	yijD	b3964	0.67	+0.3
4,160,035	-	yijD	b3964	0.67	+0.1
4,160,110	-	yijD	b3964	0.88	-0.6
4,160,113	+	yijD	b3964	0.89	-0.2
4,160,136	-				+1.6
4,160,177	-				-0.2
4,160,177	-				+0.1
4,160,190	+				+0.7
4,160,196	-				-0.1
4,160,205	+				-0.7
4,160,207	+				-2.0
4,160,207	+				-2.0
4,160,207	+				-0.3
4,160,222	+				-0.4
4,160,222	+				-0.0
4,160,229	-				-1.0
4,160,229	-				-0.3
4,160,236	+				-1.0
4,160,236	+				-0.2
4,160,241	-				+0.8
4,160,244	-				-0.6
4,160,244	-				-0.8
4,160,244	-				-0.4
4,160,244	-				-0.2
4,160,244	-				-0.6
4,160,279	-				-1.2
4,160,291	-				-0.3
4,160,313	+	trmA	b3965	0.11	-0.7
4,160,313	+	trmA	b3965	0.11	-0.2
4,160,352	-	trmA	b3965	0.14	-1.0
4,160,366	+	trmA	b3965	0.16	-0.1
4,160,371	+	trmA	b3965	0.16	-0.7
4,160,384	-	trmA	b3965	0.17	-1.4
4,160,391	-	trmA	b3965	0.18	-1.3
4,160,470	+	trmA	b3965	0.25	-1.9
4,160,530	-	trmA	b3965	0.31	-0.6
4,160,544	+	trmA	b3965	0.32	+1.3
4,160,547	-	trmA	b3965	0.32	-0.2
4,160,547	-	trmA	b3965	0.32	+0.5
4,160,549	-	trmA	b3965	0.32	-1.2
4,160,555	-	trmA	b3965	0.33	-0.4
4,160,568	-	trmA	b3965	0.34	+0.2
4,160,648	-	trmA	b3965	0.41	-2.2
4,160,673	+	trmA	b3965	0.44	+0.3
4,160,673	+	trmA	b3965	0.44	-1.6
4,160,686	+	trmA	b3965	0.45	-0.2
4,160,687	-	trmA	b3965	0.45	-0.8
4,160,687	-	trmA	b3965	0.45	-0.5
4,160,734	-	trmA	b3965	0.49	-2.5
4,160,751	-	trmA	b3965	0.51	-0.0
4,160,767	-	trmA	b3965	0.52	-0.1
4,160,767	-	trmA	b3965	0.52	-0.8
4,160,781	+	trmA	b3965	0.53	-1.0
4,160,781	-	trmA	b3965	0.53	-0.0
4,160,799	-	trmA	b3965	0.55	-0.1
4,160,877	-	trmA	b3965	0.62	+0.1
4,160,882	-	trmA	b3965	0.63	+0.4
4,160,914	+	trmA	b3965	0.65	+0.3
4,160,921	+	trmA	b3965	0.66	-0.8
4,160,921	-	trmA	b3965	0.66	-1.1
4,160,922	+	trmA	b3965	0.66	-0.9
4,160,930	-	trmA	b3965	0.67	-1.8
4,160,930	-	trmA	b3965	0.67	-0.4
4,160,952	-	trmA	b3965	0.69	-1.3
4,160,954	+	trmA	b3965	0.69	-3.1
4,160,954	+	trmA	b3965	0.69	-0.8
4,160,962	-	trmA	b3965	0.70	-0.1
4,160,969	-	trmA	b3965	0.70	+0.2
4,160,969	-	trmA	b3965	0.70	+0.1
4,160,983	-	trmA	b3965	0.72	-0.3
4,160,993	+	trmA	b3965	0.73	-0.5
4,161,011	-	trmA	b3965	0.74	-1.7
4,161,011	-	trmA	b3965	0.74	-0.0
4,161,013	+	trmA	b3965	0.74	-1.3
4,161,013	+	trmA	b3965	0.74	-1.5
4,161,021	-	trmA	b3965	0.75	-0.9
4,161,021	-	trmA	b3965	0.75	-1.0
4,161,055	-	trmA	b3965	0.78	-1.2
4,161,103	+	trmA	b3965	0.83	-1.4
4,161,139	+	trmA	b3965	0.86	-1.6
4,161,149	-	trmA	b3965	0.87	-1.2