Strain Fitness in Escherichia coli BW25113 around b3672

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,849,917	+	ilvB	b3671	0.47	-0.3
3,849,917	+	ilvB	b3671	0.47	-0.1
3,850,001	-	ilvB	b3671	0.52	-0.2
3,850,024	-	ilvB	b3671	0.54	-0.5
3,850,027	+	ilvB	b3671	0.54	-0.6
3,850,027	+	ilvB	b3671	0.54	-0.9
3,850,027	+	ilvB	b3671	0.54	-0.5
3,850,142	-	ilvB	b3671	0.61	-1.6
3,850,142	-	ilvB	b3671	0.61	-1.2
3,850,180	+	ilvB	b3671	0.63	-1.6
3,850,187	-	ilvB	b3671	0.63	-0.7
3,850,187	-	ilvB	b3671	0.63	-0.9
3,850,301	+	ilvB	b3671	0.70	-0.4
3,850,301	+	ilvB	b3671	0.70	-1.5
3,850,301	+	ilvB	b3671	0.70	-2.1
3,850,352	+	ilvB	b3671	0.73	-0.8
3,850,358	-	ilvB	b3671	0.73	-0.2
3,850,395	-	ilvB	b3671	0.76	-1.9
3,850,398	+	ilvB	b3671	0.76	+0.1
3,850,408	+	ilvB	b3671	0.76	-0.5
3,850,460	+	ilvB	b3671	0.79	-1.8
3,850,460	-	ilvB	b3671	0.79	-0.7
3,850,498	+	ilvB	b3671	0.82	-0.8
3,850,498	+	ilvB	b3671	0.82	-0.3
3,850,537	+	ilvB	b3671	0.84	-0.2
3,850,556	+	ilvB	b3671	0.85	-0.1
3,850,556	+	ilvB	b3671	0.85	-0.4
3,850,561	+	ilvB	b3671	0.85	-0.5
3,850,561	+	ilvB	b3671	0.85	+0.5
3,850,566	+	ilvB	b3671	0.86	-3.4
3,850,627	+	ilvB	b3671	0.89	-1.6
3,850,635	-	ilvB	b3671	0.90	-0.7
3,850,661	+				-0.7
3,850,674	-				-0.1
3,850,674	-				-1.5
3,850,674	-				+0.7
3,850,674	-				-0.2
3,850,690	+				-1.2
3,850,690	+				-0.7
3,850,698	-				-0.1
3,850,709	+				+0.6
3,850,709	+				-0.5
3,850,775	-				+0.2
3,850,791	+				-2.0
3,850,803	+				-0.0
3,850,805	-				-0.5
3,850,805	-				-0.6
3,850,817	-				+0.3
3,850,898	+				-0.6
3,850,901	-				-0.3
3,850,903	+				+0.1
3,850,903	+				-1.3
3,850,911	+				-0.2
3,850,919	-				-0.2
3,850,919	-				-0.6
3,850,939	-	ivbL	b3672	0.26	-0.3
3,850,965	-	ivbL	b3672	0.53	-0.7
3,850,976	+	ivbL	b3672	0.64	-1.5
3,850,976	+	ivbL	b3672	0.64	+0.6
3,850,996	+	ivbL	b3672	0.84	+3.1
3,850,996	+	ivbL	b3672	0.84	+3.8
3,851,001	+	ivbL	b3672	0.89	-3.3
3,851,001	+	ivbL	b3672	0.89	-0.8
3,851,010	+				-0.2
3,851,010	+				+0.3
3,851,369	+				+0.2
3,851,369	+				+0.6
3,851,379	-				+0.5
3,851,379	-				-0.6
3,851,446	-				-0.9
3,851,446	-				+0.9
3,851,464	-				+0.5
3,851,469	-				-0.8
3,851,469	-				+0.1
3,851,469	-				-0.5
3,851,491	+				-0.3
3,851,493	+				-0.7
3,851,499	-				-0.9
3,851,514	-				+0.2
3,851,545	+				+0.2
3,851,545	+				-0.3
3,851,553	+				-0.1
3,851,592	+	tisB	b4618	0.18	+0.1
3,851,605	+	tisB	b4618	0.32	-0.3
3,851,627	-	tisB	b4618	0.57	+0.2
3,851,644	-	tisB	b4618	0.76	-0.2
3,851,709	+				-0.3
3,851,733	+				-0.3
3,851,733	+				-0.2
3,851,772	-				-0.3
3,851,849	-				+0.3
3,851,851	-				+0.2
3,851,977	-				-0.1
3,851,978	+				-0.2
3,851,978	+				-0.6
3,851,986	-				+0.2
3,851,990	+				+0.2
3,851,990	+				-0.2
3,851,997	-				-0.5
3,852,000	-				-0.2