Strain Fitness in Escherichia coli BW25113 around b3457

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
3,592,590	-	livM	b3456	0.28	+0.5
3,592,640	+	livM	b3456	0.32	-0.0
3,592,763	+	livM	b3456	0.42	+0.4
3,592,763	+	livM	b3456	0.42	-1.0
3,592,768	+	livM	b3456	0.42	-0.3
3,592,768	+	livM	b3456	0.42	+1.0
3,592,822	+	livM	b3456	0.47	+0.4
3,592,822	+	livM	b3456	0.47	+1.0
3,592,834	+	livM	b3456	0.48	+0.1
3,593,081	+	livM	b3456	0.67	+0.5
3,593,081	+	livM	b3456	0.67	+0.4
3,593,103	-	livM	b3456	0.69	-0.8
3,593,103	-	livM	b3456	0.69	+0.7
3,593,139	+	livM	b3456	0.71	+0.5
3,593,210	+	livM	b3456	0.77	+0.2
3,593,210	+	livM	b3456	0.77	-0.4
3,593,244	+	livM	b3456	0.80	+0.3
3,593,339	+	livM	b3456	0.87	+0.0
3,593,375	-	livM	b3456	0.90	+0.2
3,593,383	-				-0.1
3,593,383	-				-2.1
3,593,401	+				+0.1
3,593,409	-				+0.4
3,593,424	-				+0.4
3,593,438	-				-0.1
3,593,438	-				-0.0
3,593,524	+				+0.1
3,593,620	-	livH	b3457	0.13	+0.2
3,593,620	-	livH	b3457	0.13	+1.1
3,593,655	-	livH	b3457	0.17	+0.4
3,593,655	-	livH	b3457	0.17	+1.3
3,593,655	-	livH	b3457	0.17	+0.5
3,593,655	-	livH	b3457	0.17	+1.2
3,593,660	+	livH	b3457	0.17	+0.7
3,593,660	+	livH	b3457	0.17	+0.3
3,593,749	+	livH	b3457	0.27	-0.2
3,593,825	+	livH	b3457	0.35	+1.1
3,593,833	-	livH	b3457	0.36	+0.9
3,593,869	+	livH	b3457	0.40	+0.5
3,593,942	+	livH	b3457	0.48	+0.6
3,593,942	+	livH	b3457	0.48	+0.7
3,593,966	-	livH	b3457	0.50	+0.3
3,594,055	-	livH	b3457	0.60	+0.2
3,594,098	-	livH	b3457	0.65	+0.6
3,594,150	+	livH	b3457	0.70	+1.0
3,594,150	+	livH	b3457	0.70	+0.9
3,594,220	+	livH	b3457	0.78	+0.2
3,594,232	-	livH	b3457	0.79	-0.1
3,594,232	-	livH	b3457	0.79	+1.3
3,594,236	+	livH	b3457	0.79	-0.3
3,594,236	+	livH	b3457	0.79	+0.7
3,594,346	-				+0.5
3,594,350	-				+0.9
3,594,350	-				-0.7
3,594,404	-				-0.3
3,594,404	-				+0.1
3,594,417	+				+0.9
3,594,469	+				+0.8
3,594,485	-				+0.1
3,594,518	-				+2.7
3,594,593	+	livK	b3458	0.11	+0.3
3,594,638	+	livK	b3458	0.15	+0.1
3,594,639	+	livK	b3458	0.15	+0.1
3,594,639	+	livK	b3458	0.15	+0.7
3,594,639	+	livK	b3458	0.15	+0.5
3,594,639	+	livK	b3458	0.15	+0.1
3,594,743	-	livK	b3458	0.24	-0.2
3,594,821	+	livK	b3458	0.31	+0.2
3,594,876	+	livK	b3458	0.36	+0.6
3,594,876	+	livK	b3458	0.36	-0.1
3,594,908	+	livK	b3458	0.39	-0.7
3,594,954	+	livK	b3458	0.43	-0.4
3,595,035	+	livK	b3458	0.51	-0.4
3,595,043	-	livK	b3458	0.51	+0.5
3,595,053	-	livK	b3458	0.52	+0.4
3,595,097	+	livK	b3458	0.56	+0.3
3,595,109	-	livK	b3458	0.57	+0.3
3,595,142	+	livK	b3458	0.60	-0.8
3,595,199	+	livK	b3458	0.65	+0.9
3,595,207	-	livK	b3458	0.66	+0.1
3,595,207	-	livK	b3458	0.66	+0.1
3,595,207	-	livK	b3458	0.66	-0.7
3,595,264	+	livK	b3458	0.71	+1.1
3,595,276	-	livK	b3458	0.72	-0.3
3,595,343	-	livK	b3458	0.78	+1.1
3,595,343	-	livK	b3458	0.78	+0.9
3,595,354	-	livK	b3458	0.79	+0.3
3,595,365	+	livK	b3458	0.80	-2.3