Strain Fitness in Escherichia coli BW25113 around b2741

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,863,582	+	ygbN	b2740	0.34	+2.5
2,863,627	+	ygbN	b2740	0.37	-0.1
2,863,627	+	ygbN	b2740	0.37	-0.3
2,863,627	+	ygbN	b2740	0.37	+1.4
2,863,627	+	ygbN	b2740	0.37	-0.2
2,863,693	-	ygbN	b2740	0.42	+0.2
2,863,751	+	ygbN	b2740	0.46	+0.4
2,863,782	-	ygbN	b2740	0.48	+0.2
2,863,832	+	ygbN	b2740	0.52	+0.6
2,863,861	-	ygbN	b2740	0.54	+0.4
2,863,861	-	ygbN	b2740	0.54	-0.1
2,863,933	+	ygbN	b2740	0.59	+0.2
2,863,961	-	ygbN	b2740	0.61	+0.3
2,863,961	-	ygbN	b2740	0.61	+0.3
2,864,020	+	ygbN	b2740	0.66	+0.3
2,864,020	+	ygbN	b2740	0.66	-0.2
2,864,026	-	ygbN	b2740	0.66	+2.0
2,864,036	+	ygbN	b2740	0.67	+0.4
2,864,038	+	ygbN	b2740	0.67	-0.4
2,864,038	+	ygbN	b2740	0.67	-1.6
2,864,101	-	ygbN	b2740	0.72	+0.6
2,864,148	-	ygbN	b2740	0.75	-0.3
2,864,150	+	ygbN	b2740	0.75	+0.5
2,864,231	-	ygbN	b2740	0.81	-1.2
2,864,231	-	ygbN	b2740	0.81	+0.6
2,864,395	+				+0.2
2,864,422	+				-0.1
2,864,463	-				-0.1
2,864,590	+				+4.1
2,864,608	-				+0.1
2,864,608	-				+0.5
2,864,641	+				+3.9
2,864,656	-				+4.6
2,864,698	+	rpoS	b2741	0.12	+4.5
2,864,840	-				+3.9
2,864,866	+	rpoS	b2741	0.29	+4.3
2,864,925	+	rpoS	b2741	0.35	+4.6
2,864,925	+	rpoS	b2741	0.35	+4.3
2,865,021	+	rpoS	b2741	0.44	+4.1
2,865,037	+	rpoS	b2741	0.46	+4.3
2,865,044	+	rpoS	b2741	0.47	+4.2
2,865,047	-	rpoS	b2741	0.47	+4.5
2,865,085	-	rpoS	b2741	0.51	+4.1
2,865,116	-	rpoS	b2741	0.54	+4.4
2,865,175	+	rpoS	b2741	0.60	+4.2
2,865,190	+	rpoS	b2741	0.61	+4.3
2,865,195	+	rpoS	b2741	0.62	+4.8
2,865,198	-	rpoS	b2741	0.62	+3.6
2,865,376	-	rpoS	b2741	0.80	+4.0
2,865,389	+	rpoS	b2741	0.81	+4.4
2,865,415	+	rpoS	b2741	0.84	+4.5
2,865,447	-	rpoS	b2741	0.87	+4.4
2,865,490	-				+1.7
2,865,512	-				+3.9
2,865,598	-				+0.1
2,865,598	-				+0.1
2,865,764	-	nlpD	b2742	0.11	+0.9
2,865,788	+	nlpD	b2742	0.13	+1.3
2,865,788	+	nlpD	b2742	0.13	+1.4
2,865,805	-	nlpD	b2742	0.15	-0.1
2,865,817	-	nlpD	b2742	0.16	+1.0
2,865,867	+	nlpD	b2742	0.20	-0.4
2,866,116	+	nlpD	b2742	0.42	+0.4
2,866,116	+	nlpD	b2742	0.42	+0.6
2,866,149	+	nlpD	b2742	0.45	+1.1
2,866,172	+	nlpD	b2742	0.47	+0.1
2,866,210	+	nlpD	b2742	0.50	+0.6
2,866,212	+	nlpD	b2742	0.51	+0.3
2,866,265	-	nlpD	b2742	0.55	+0.8
2,866,380	+	nlpD	b2742	0.65	+0.7
2,866,380	+	nlpD	b2742	0.65	+1.5
2,866,414	-	nlpD	b2742	0.68	+0.2
2,866,414	-	nlpD	b2742	0.68	+0.1
2,866,436	+	nlpD	b2742	0.70	-0.1
2,866,441	+	nlpD	b2742	0.71	-0.3
2,866,463	-	nlpD	b2742	0.73	+0.2
2,866,463	-	nlpD	b2742	0.73	+0.6
2,866,511	-	nlpD	b2742	0.77	+0.1
2,866,511	-	nlpD	b2742	0.77	-0.0