Strain Fitness in Escherichia coli BW25113 around b2605
Experiment: Ying_OrganicAcid7 rep B; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep B; time point 2 |
---|---|---|---|---|---|
remove | |||||
2,740,661 | - | yfiN | b2604 | 0.21 | +0.4 |
2,740,786 | - | yfiN | b2604 | 0.31 | +0.6 |
2,740,786 | - | yfiN | b2604 | 0.31 | -0.5 |
2,740,786 | - | yfiN | b2604 | 0.31 | +0.6 |
2,740,786 | - | yfiN | b2604 | 0.31 | -0.1 |
2,740,888 | + | yfiN | b2604 | 0.39 | +0.5 |
2,740,898 | + | yfiN | b2604 | 0.40 | +0.5 |
2,740,987 | + | yfiN | b2604 | 0.47 | +0.1 |
2,740,987 | + | yfiN | b2604 | 0.47 | +0.3 |
2,741,136 | + | yfiN | b2604 | 0.60 | -0.1 |
2,741,136 | + | yfiN | b2604 | 0.60 | +0.2 |
2,741,149 | + | yfiN | b2604 | 0.61 | +0.6 |
2,741,289 | + | yfiN | b2604 | 0.72 | +0.0 |
2,741,397 | + | yfiN | b2604 | 0.81 | -0.9 |
2,741,397 | + | yfiN | b2604 | 0.81 | +0.1 |
2,741,407 | - | yfiN | b2604 | 0.82 | +0.3 |
2,741,414 | - | yfiN | b2604 | 0.82 | -0.2 |
2,741,439 | + | yfiN | b2604 | 0.84 | +0.2 |
2,741,447 | + | yfiN | b2604 | 0.85 | +0.2 |
2,741,542 | + | +0.1 | |||
2,741,682 | - | +0.5 | |||
2,741,682 | - | +0.1 | |||
2,741,721 | + | yfiB | b2605 | 0.15 | -0.7 |
2,741,854 | - | yfiB | b2605 | 0.43 | -0.3 |
2,741,875 | + | yfiB | b2605 | 0.47 | -0.2 |
2,741,875 | + | yfiB | b2605 | 0.47 | +0.2 |
2,741,899 | - | yfiB | b2605 | 0.52 | +0.9 |
2,741,994 | + | yfiB | b2605 | 0.72 | +0.7 |
2,741,994 | + | yfiB | b2605 | 0.72 | +1.4 |
2,742,002 | - | yfiB | b2605 | 0.73 | -0.1 |
2,742,076 | + | yfiB | b2605 | 0.89 | -0.1 |
2,742,111 | + | +0.8 | |||
2,742,111 | + | +0.5 | |||
2,742,169 | - | -0.4 | |||
2,742,169 | - | +1.0 | |||
2,742,182 | - | +0.3 | |||
2,742,182 | - | +0.6 | |||
2,742,227 | - | +0.4 | |||
2,742,626 | - | +0.1 |
Or see this region's nucleotide sequence