Strain Fitness in Escherichia coli BW25113 around b2229

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,331,457	+	yfaS	b4500	0.79	+0.6
2,331,467	+	yfaS	b4500	0.79	+1.4
2,331,498	-	yfaS	b4500	0.80	+0.2
2,331,508	+	yfaS	b4500	0.80	+0.4
2,331,509	-	yfaS	b4500	0.80	-0.1
2,331,564	-	yfaS	b4500	0.81	+1.1
2,331,593	+	yfaS	b4500	0.82	-0.1
2,331,695	-	yfaS	b4500	0.84	+0.1
2,331,711	+	yfaS	b4500	0.84	+0.2
2,332,014	+				-0.2
2,332,020	+				+0.1
2,332,020	+				-0.0
2,332,048	-				+0.4
2,332,048	-				-0.1
2,332,166	+				+0.1
2,332,169	-				-0.1
2,332,169	-				-0.4
2,332,223	+				+0.6
2,332,230	-				-0.5
2,332,231	-				-0.5
2,332,448	-	b2229	b2229	0.14	-0.8
2,332,531	+	b2229	b2229	0.28	-0.1
2,332,531	+	b2229	b2229	0.28	+0.5
2,332,697	-	b2229	b2229	0.54	+4.1
2,332,834	+	b2229	b2229	0.76	+0.2
2,332,876	+	b2229	b2229	0.83	+0.0
2,332,892	+	b2229	b2229	0.86	+0.5
2,332,944	-				-0.3
2,333,058	-				+0.5
2,333,072	-				-0.7
2,333,072	-				+0.2
2,333,184	+	yfaA	b2230	0.12	+0.3
2,333,184	+	yfaA	b2230	0.12	-0.2
2,333,184	+	yfaA	b2230	0.12	+0.1
2,333,215	+	yfaA	b2230	0.14	+0.7
2,333,326	-	yfaA	b2230	0.21	+0.2
2,333,527	+	yfaA	b2230	0.33	-0.2
2,333,588	+	yfaA	b2230	0.36	+0.6
2,333,588	+	yfaA	b2230	0.36	-0.1
2,333,608	+	yfaA	b2230	0.37	+0.0
2,333,609	-	yfaA	b2230	0.37	+0.1
2,333,619	-	yfaA	b2230	0.38	-0.1
2,333,619	-	yfaA	b2230	0.38	+0.4
2,333,619	-	yfaA	b2230	0.38	+1.3
2,333,621	+	yfaA	b2230	0.38	+0.1
2,333,621	+	yfaA	b2230	0.38	+0.5
2,333,658	-	yfaA	b2230	0.40	+0.5
2,333,697	+	yfaA	b2230	0.43	-0.6
2,333,697	+	yfaA	b2230	0.43	-0.7
2,333,725	+	yfaA	b2230	0.44	-0.1