Strain Fitness in Escherichia coli BW25113 around b1705
Experiment: Ying_OrganicAcid7 rep B; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep B; time point 2 |
---|---|---|---|---|---|
remove | |||||
1,786,668 | - | aroH | b1704 | 0.20 | -0.3 |
1,786,668 | - | aroH | b1704 | 0.20 | +0.7 |
1,786,722 | + | aroH | b1704 | 0.25 | +0.3 |
1,786,897 | - | aroH | b1704 | 0.42 | +0.1 |
1,787,055 | - | aroH | b1704 | 0.57 | -0.1 |
1,787,210 | - | aroH | b1704 | 0.72 | +0.3 |
1,787,217 | - | aroH | b1704 | 0.72 | -0.6 |
1,787,434 | - | -2.1 | |||
1,788,003 | + | ydiU | b1706 | 0.12 | -0.1 |
1,788,003 | + | ydiU | b1706 | 0.12 | +0.7 |
1,788,058 | - | ydiU | b1706 | 0.16 | -0.3 |
1,788,058 | - | ydiU | b1706 | 0.16 | -0.2 |
1,788,158 | - | ydiU | b1706 | 0.23 | +0.0 |
1,788,163 | - | ydiU | b1706 | 0.23 | -0.7 |
1,788,163 | - | ydiU | b1706 | 0.23 | +0.1 |
1,788,521 | - | ydiU | b1706 | 0.48 | +0.1 |
1,788,521 | - | ydiU | b1706 | 0.48 | -0.0 |
1,788,760 | + | ydiU | b1706 | 0.65 | +1.1 |
1,788,775 | - | ydiU | b1706 | 0.66 | +0.4 |
1,788,775 | - | ydiU | b1706 | 0.66 | -0.0 |
Or see this region's nucleotide sequence