Strain Fitness in Escherichia coli BW25113 around b1398

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,459,188	+	paaJ	b1397	0.22	-0.3
1,459,188	+	paaJ	b1397	0.22	-0.7
1,459,425	+	paaJ	b1397	0.42	-0.2
1,459,425	+	paaJ	b1397	0.42	-0.6
1,459,608	+	paaJ	b1397	0.57	-0.3
1,459,647	+				+0.5
1,459,698	+	paaJ	b1397	0.65	-0.7
1,459,778	-	paaJ	b1397	0.71	-0.1
1,459,803	+	paaJ	b1397	0.73	-0.2
1,459,882	+	paaJ	b1397	0.80	-1.7
1,459,898	+	paaJ	b1397	0.81	-1.2
1,459,916	-	paaJ	b1397	0.83	-0.6
1,459,976	+	paaJ	b1397	0.88	+0.3
1,460,080	-				-0.2
1,460,092	+				-0.1
1,461,222	-	paaK	b1398	0.82	+0.7
1,461,441	+				-0.5
1,461,562	+				-0.4
1,461,562	+				+0.2
1,461,638	+				+0.3
1,461,687	+	paaX	b1399	0.13	-0.6
1,461,873	+	paaX	b1399	0.33	+0.5
1,461,873	+	paaX	b1399	0.33	-0.8
1,461,938	+	paaX	b1399	0.39	+1.3
1,461,978	+	paaX	b1399	0.44	+0.1
1,462,399	-	paaX	b1399	0.88	+0.1