Strain Fitness in Escherichia coli BW25113 around b1090

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,145,847	-	sraB	b4418	0.21	-0.3
1,146,042	+				-0.6
1,146,052	+				-1.5
1,146,096	+	yceD	b1088	0.15	-0.3
1,146,096	+	yceD	b1088	0.15	-0.7
1,146,117	+	yceD	b1088	0.19	+0.7
1,146,265	+	yceD	b1088	0.48	-0.9
1,146,265	+	yceD	b1088	0.48	-0.3
1,146,265	+	yceD	b1088	0.48	-0.8
1,146,265	+	yceD	b1088	0.48	-0.8
1,146,277	+	yceD	b1088	0.50	-0.7
1,146,277	+	yceD	b1088	0.50	+0.4
1,146,310	+	yceD	b1088	0.56	+0.1
1,146,373	+	yceD	b1088	0.68	-3.7
1,146,373	+	yceD	b1088	0.68	-1.4
1,146,987	+	plsX	b1090	0.13	+0.2
1,147,009	-	plsX	b1090	0.15	+0.6
1,147,019	-	plsX	b1090	0.16	+1.0
1,147,019	-	plsX	b1090	0.16	+1.1
1,147,059	+	plsX	b1090	0.20	+0.7
1,147,130	-	plsX	b1090	0.27	+0.6
1,147,298	+	plsX	b1090	0.42	+0.7
1,147,298	+	plsX	b1090	0.42	-0.3
1,147,385	-	plsX	b1090	0.51	+1.0
1,147,385	-	plsX	b1090	0.51	+1.8
1,147,429	+	plsX	b1090	0.55	+0.4
1,147,551	+	plsX	b1090	0.66	+0.1
1,147,595	-				+1.5
1,147,595	-	plsX	b1090	0.70	-0.1
1,147,722	+	plsX	b1090	0.82	+0.6
1,147,981	+				+0.2