Strain Fitness in Escherichia coli BW25113 around b4425

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
1,285,352	-	narI	b1227	0.41	-1.0
1,285,352	-	narI	b1227	0.41	+1.0
1,285,476	+	narI	b1227	0.60	+0.7
1,285,509	-	narI	b1227	0.64	+0.3
1,285,518	+	narI	b1227	0.66	-0.4
1,285,518	+	narI	b1227	0.66	+0.2
1,285,526	-	narI	b1227	0.67	-1.6
1,285,605	-	narI	b1227	0.79	+0.3
1,285,670	-	narI	b1227	0.88	-0.3
1,285,686	+				-0.8
1,285,694	-				-1.2
1,285,707	+				-0.3
1,286,125	+				-0.1
1,286,316	-				+0.3
1,286,316	-				+0.5
1,286,690	-				-0.3
1,286,690	-				-0.5
1,286,805	+	tyrT	b1231	0.52	-0.7
1,286,916	+				-0.8
1,287,056	+				-1.5
1,287,064	+				-4.3
1,287,233	+	purU	b1232	0.27	-3.4
1,287,255	-	purU	b1232	0.30	-3.1
1,287,255	-	purU	b1232	0.30	-1.5
1,287,342	+	purU	b1232	0.40	-3.9
1,287,375	+	purU	b1232	0.44	-3.0
1,287,423	-	purU	b1232	0.50	-3.7
1,287,425	+	purU	b1232	0.50	-3.8
1,287,439	+	purU	b1232	0.51	-2.5
1,287,448	+	purU	b1232	0.53	-4.2