Strain Fitness in Escherichia coli BW25113 around b3169
Experiment: Ying_OrganicAcid7 rep A; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep A; time point 2 |
---|---|---|---|---|---|
remove | |||||
3,313,766 | - | infB | b3168 | 0.90 | -1.9 |
3,313,842 | - | -3.5 | |||
3,313,932 | - | -1.8 | |||
3,313,976 | - | -2.5 | |||
3,314,038 | - | -3.4 | |||
3,314,051 | - | -0.4 | |||
3,314,051 | - | -0.7 | |||
3,314,233 | - | nusA | b3169 | 0.12 | -4.6 |
3,314,249 | - | nusA | b3169 | 0.13 | -5.3 |
3,314,252 | - | nusA | b3169 | 0.13 | -1.4 |
3,314,302 | - | nusA | b3169 | 0.16 | -4.6 |
3,314,302 | - | nusA | b3169 | 0.16 | -3.8 |
3,314,302 | - | nusA | b3169 | 0.16 | -1.8 |
3,316,026 | - | -2.0 | |||
3,316,402 | + | -0.6 | |||
3,316,506 | - | -0.3 | |||
3,316,506 | - | -0.1 |
Or see this region's nucleotide sequence