Strain Fitness in Escherichia coli BW25113 around b3094

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
3,243,720	-	exuT	b3093	0.42	+0.5
3,243,777	-	exuT	b3093	0.46	-1.2
3,243,867	-	exuT	b3093	0.52	-0.8
3,243,881	+	exuT	b3093	0.53	-0.4
3,243,899	-	exuT	b3093	0.54	+0.1
3,243,911	+	exuT	b3093	0.55	+0.4
3,243,911	+	exuT	b3093	0.55	-0.6
3,243,968	+	exuT	b3093	0.59	+0.2
3,244,006	+	exuT	b3093	0.62	+0.4
3,244,035	-	exuT	b3093	0.64	-0.5
3,244,035	-	exuT	b3093	0.64	+0.4
3,244,067	+	exuT	b3093	0.66	-1.0
3,244,067	+	exuT	b3093	0.66	-0.6
3,244,131	-	exuT	b3093	0.71	-0.4
3,244,144	+	exuT	b3093	0.72	-0.2
3,244,144	+	exuT	b3093	0.72	+0.4
3,244,176	+	exuT	b3093	0.74	-0.3
3,244,178	+	exuT	b3093	0.74	-2.0
3,244,208	+	exuT	b3093	0.76	+0.3
3,244,474	-				+1.0
3,244,474	-				-1.1
3,244,496	+				-0.0
3,244,505	+				-0.5
3,244,577	-				+0.1
3,244,577	-				+0.0
3,244,621	-				-0.4
3,244,621	-				+0.5
3,244,651	+				+0.3
3,244,664	-				-1.1
3,244,668	-				-0.1
3,244,689	-				-0.3
3,244,742	-				-0.4
3,244,860	-	exuR	b3094	0.24	+0.0
3,245,058	-	exuR	b3094	0.49	-0.7
3,245,058	-	exuR	b3094	0.49	-0.2
3,245,086	-	exuR	b3094	0.53	-0.9
3,245,086	-	exuR	b3094	0.53	-0.4
3,245,098	-	exuR	b3094	0.55	-0.3
3,245,168	+	exuR	b3094	0.64	+1.1
3,245,168	+	exuR	b3094	0.64	-1.3
3,245,183	-	exuR	b3094	0.66	-0.6
3,245,200	+	exuR	b3094	0.68	-0.5
3,245,217	-	exuR	b3094	0.70	-0.7
3,245,299	+	exuR	b3094	0.80	-1.0
3,245,299	+	exuR	b3094	0.80	-0.3
3,245,376	-				-0.3
3,245,415	+				-1.2
3,245,420	+				-0.4
3,245,512	+				+0.4
3,245,514	+				+0.0
3,245,522	-				+0.2
3,245,532	-				+0.3
3,245,536	+				-0.1
3,245,536	+				-0.1
3,245,546	+				+0.2
3,245,546	+				-0.6
3,245,554	-				-0.1
3,245,554	-				+0.1
3,245,556	-				-0.9
3,245,607	+				-0.1
3,245,651	+				-0.1
3,245,676	+				-0.5
3,245,678	+				+0.5
3,245,679	-				-0.1
3,245,684	-				-0.6
3,245,684	-				-0.6
3,245,684	-				-0.4
3,245,690	-				-0.5
3,245,695	+				+0.0
3,245,712	-				-0.8
3,245,726	+				-0.0
3,245,856	+				+0.5
3,245,914	-	yqjA	b3095	0.18	-0.1
3,245,923	-	yqjA	b3095	0.19	+0.2
3,245,950	-	yqjA	b3095	0.23	-0.0
3,246,000	-	yqjA	b3095	0.31	+0.1
3,246,005	-	yqjA	b3095	0.32	-0.3
3,246,059	-	yqjA	b3095	0.40	+0.5
3,246,059	-	yqjA	b3095	0.40	-0.7
3,246,059	-	yqjA	b3095	0.40	+0.2
3,246,059	-	yqjA	b3095	0.40	-0.6
3,246,070	+	yqjA	b3095	0.41	+0.3
3,246,082	-	yqjA	b3095	0.43	+0.3
3,246,082	-	yqjA	b3095	0.43	-0.1
3,246,097	-	yqjA	b3095	0.46	+0.4
3,246,097	-	yqjA	b3095	0.46	-0.3
3,246,128	-	yqjA	b3095	0.50	-0.2
3,246,128	-	yqjA	b3095	0.50	+0.1
3,246,159	+	yqjA	b3095	0.55	-0.3
3,246,159	+	yqjA	b3095	0.55	-0.0
3,246,196	+	yqjA	b3095	0.60	+0.3
3,246,204	-	yqjA	b3095	0.62	-0.4
3,246,233	+	yqjA	b3095	0.66	+0.2
3,246,233	+	yqjA	b3095	0.66	+0.0
3,246,280	+	yqjA	b3095	0.73	+0.3
3,246,286	+	yqjA	b3095	0.74	-0.2
3,246,288	-	yqjA	b3095	0.74	-0.8
3,246,288	-	yqjA	b3095	0.74	+0.1
3,246,310	-	yqjA	b3095	0.78	-0.4