Strain Fitness in Escherichia coli BW25113 around b2279

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
2,392,091	-	nuoL	b2278	0.47	-0.4
2,392,137	+	nuoL	b2278	0.49	-2.1
2,392,139	-	nuoL	b2278	0.50	-2.5
2,392,139	-	nuoL	b2278	0.50	-0.6
2,392,161	-	nuoL	b2278	0.51	-1.9
2,392,164	+	nuoL	b2278	0.51	-4.4
2,392,164	+	nuoL	b2278	0.51	-3.6
2,392,168	+	nuoL	b2278	0.51	-1.7
2,392,192	+	nuoL	b2278	0.52	-2.1
2,392,206	-	nuoL	b2278	0.53	-1.8
2,392,226	+	nuoL	b2278	0.54	-2.3
2,392,234	+	nuoL	b2278	0.55	-2.1
2,392,245	+	nuoL	b2278	0.55	-2.6
2,392,245	+	nuoL	b2278	0.55	-2.7
2,392,245	+				-0.2
2,392,253	-	nuoL	b2278	0.56	-1.7
2,392,253	-	nuoL	b2278	0.56	-3.9
2,392,255	+	nuoL	b2278	0.56	-2.6
2,392,290	-	nuoL	b2278	0.58	-0.2
2,392,315	+	nuoL	b2278	0.59	-0.7
2,392,403	-	nuoL	b2278	0.64	-1.7
2,392,403	-	nuoL	b2278	0.64	-1.3
2,392,419	-	nuoL	b2278	0.65	-1.4
2,392,424	-	nuoL	b2278	0.65	-2.7
2,392,488	-	nuoL	b2278	0.68	-3.0
2,392,498	-	nuoL	b2278	0.69	-2.5
2,392,537	-	nuoL	b2278	0.71	-0.2
2,392,555	-	nuoL	b2278	0.72	-2.2
2,392,578	+	nuoL	b2278	0.73	-2.1
2,392,593	+	nuoL	b2278	0.74	-0.6
2,392,593	+	nuoL	b2278	0.74	-1.6
2,392,593	+	nuoL	b2278	0.74	-2.6
2,392,601	-	nuoL	b2278	0.75	-1.4
2,392,601	-	nuoL	b2278	0.75	-2.7
2,392,601	-	nuoL	b2278	0.75	-1.2
2,392,620	+	nuoL	b2278	0.76	-2.1
2,392,627	+	nuoL	b2278	0.76	-2.0
2,392,694	-	nuoL	b2278	0.80	-2.1
2,392,723	+	nuoL	b2278	0.81	-1.2
2,392,723	+	nuoL	b2278	0.81	-1.6
2,392,728	+	nuoL	b2278	0.81	-1.5
2,392,728	+	nuoL	b2278	0.81	-4.0
2,392,771	+	nuoL	b2278	0.84	-1.9
2,392,776	+	nuoL	b2278	0.84	-1.8
2,392,831	-	nuoL	b2278	0.87	-1.1
2,392,831	-	nuoL	b2278	0.87	-3.3
2,392,831	-	nuoL	b2278	0.87	-3.8
2,392,831	-	nuoL	b2278	0.87	-2.7
2,392,874	-	nuoL	b2278	0.89	-3.1
2,392,895	-				-2.0
2,393,077	+				-1.5
2,393,077	+				-2.5
2,393,106	+	nuoK	b2279	0.14	-0.7
2,393,152	-	nuoK	b2279	0.29	-3.6
2,393,213	-	nuoK	b2279	0.49	-1.8
2,393,323	+	nuoK	b2279	0.85	-1.9
2,393,346	+				-0.6
2,393,410	+				-2.8
2,393,412	+				-3.8
2,393,412	+				-1.6
2,393,419	+				-1.2
2,393,456	-	nuoJ	b2280	0.17	-0.5
2,393,463	-	nuoJ	b2280	0.18	-0.1
2,393,530	-	nuoJ	b2280	0.30	-2.3
2,393,530	-	nuoJ	b2280	0.30	-2.1
2,393,536	+	nuoJ	b2280	0.31	-1.0
2,393,559	+	nuoJ	b2280	0.35	-1.6
2,393,581	-	nuoJ	b2280	0.39	-0.2
2,393,586	-	nuoJ	b2280	0.40	-2.4
2,393,606	+	nuoJ	b2280	0.44	-2.4
2,393,611	-	nuoJ	b2280	0.45	-2.7
2,393,617	+	nuoJ	b2280	0.46	-3.6
2,393,637	+	nuoJ	b2280	0.49	-3.1
2,393,638	+	nuoJ	b2280	0.49	-1.8
2,393,638	+	nuoJ	b2280	0.49	-2.7
2,393,645	+	nuoJ	b2280	0.51	-2.0
2,393,724	+	nuoJ	b2280	0.65	-2.8
2,393,731	-	nuoJ	b2280	0.66	-3.5
2,393,839	-	nuoJ	b2280	0.86	-2.1
2,393,840	+	nuoJ	b2280	0.86	-2.6
2,393,876	+				-1.6
2,393,898	-				-1.7
2,393,915	+				-1.0
2,393,915	+				-0.4
2,393,967	-				-2.2
2,393,967	-				-2.7
2,394,043	+	nuoI	b2281	0.21	-0.8
2,394,124	-	nuoI	b2281	0.36	-1.5
2,394,163	+	nuoI	b2281	0.43	-1.7
2,394,320	+	nuoI	b2281	0.72	-4.4
2,394,328	-	nuoI	b2281	0.73	-2.1
2,394,345	-	nuoI	b2281	0.76	-2.7
2,394,347	-	nuoI	b2281	0.77	-0.2