Strain Fitness in Escherichia coli BW25113 around b4143

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
4,368,064	+	yjeH	b4141	0.70	+0.4
4,368,100	-	yjeH	b4141	0.73	+0.3
4,368,169	+	yjeH	b4141	0.79	-0.1
4,368,235	-	yjeH	b4141	0.84	-0.5
4,368,312	-				+0.0
4,368,316	+				-0.5
4,368,388	-				+0.1
4,368,402	+				-0.7
4,368,402	+				+0.5
4,368,547	+				-0.8
4,368,600	+				+0.2
4,368,608	-				+2.8
4,368,999	+				-0.3
4,369,015	+				+1.2
4,369,015	+				-0.6
4,369,037	+				+0.5
4,370,697	+				-0.6
4,370,697	+				+0.1
4,370,705	-				-0.7
4,370,707	+				-0.8
4,370,707	+				-1.1
4,370,868	+	yjeI	b4144	0.10	-0.1
4,370,873	+	yjeI	b4144	0.12	+0.3
4,370,974	-	yjeI	b4144	0.40	+0.3
4,371,100	+	yjeI	b4144	0.76	+0.6
4,371,165	+				-0.8
4,371,173	-				-0.8
4,371,198	-				-0.2
4,371,198	-				+1.3
4,371,247	+				+0.1
4,371,247	+				-0.2
4,371,254	+				+0.2
4,371,366	-				+0.1
4,371,366	-				-0.5
4,371,379	-				+0.1
4,371,418	+				+0.1
4,371,441	-				-0.7
4,371,441	-				+0.8
4,371,441	-				+0.3
4,371,456	+				-0.5
4,371,456	+				+0.2
4,371,465	-				-0.3
4,371,484	+	yjeJ	b4145	0.11	+0.8
4,371,494	+	yjeJ	b4145	0.12	-0.3
4,371,501	+	yjeJ	b4145	0.13	-0.1
4,371,505	+	yjeJ	b4145	0.13	+0.4
4,371,505	+	yjeJ	b4145	0.13	-0.5
4,371,517	-	yjeJ	b4145	0.15	+0.6
4,371,517	-	yjeJ	b4145	0.15	-0.2
4,371,522	-	yjeJ	b4145	0.15	-0.1
4,371,573	+	yjeJ	b4145	0.21	-0.7
4,371,599	-	yjeJ	b4145	0.24	+0.0
4,371,599	-	yjeJ	b4145	0.24	+0.2
4,371,612	+	yjeJ	b4145	0.26	+0.2
4,371,620	-	yjeJ	b4145	0.27	+0.5
4,371,620	-	yjeJ	b4145	0.27	-0.9
4,371,656	+	yjeJ	b4145	0.31	+0.1
4,371,656	+	yjeJ	b4145	0.31	+0.0
4,371,670	-	yjeJ	b4145	0.32	+0.1
4,371,694	+	yjeJ	b4145	0.35	-0.4
4,371,694	+	yjeJ	b4145	0.35	-0.5