Strain Fitness in Escherichia coli BW25113 around b3918

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
4,106,970	+	sbp	b3917	0.11	-0.3
4,106,970	+	sbp	b3917	0.11	-0.1
4,106,970	+	sbp	b3917	0.11	+0.6
4,106,999	-	sbp	b3917	0.14	-0.7
4,106,999	-	sbp	b3917	0.14	+0.2
4,107,116	-	sbp	b3917	0.26	-0.0
4,107,144	+	sbp	b3917	0.29	-0.1
4,107,159	+	sbp	b3917	0.31	-0.1
4,107,167	+	sbp	b3917	0.31	+0.3
4,107,179	+	sbp	b3917	0.33	-0.4
4,107,187	-	sbp	b3917	0.33	+0.7
4,107,189	+	sbp	b3917	0.34	+0.2
4,107,238	+	sbp	b3917	0.38	+0.1
4,107,292	-	sbp	b3917	0.44	+0.0
4,107,292	-	sbp	b3917	0.44	-0.2
4,107,299	+	sbp	b3917	0.45	-0.8
4,107,321	-	sbp	b3917	0.47	-0.2
4,107,321	-	sbp	b3917	0.47	-0.0
4,107,329	-	sbp	b3917	0.48	-0.3
4,107,339	-	sbp	b3917	0.49	-0.3
4,107,357	+	sbp	b3917	0.51	+0.1
4,107,357	+	sbp	b3917	0.51	+0.1
4,107,369	+	sbp	b3917	0.52	+0.5
4,107,369	+	sbp	b3917	0.52	+0.2
4,107,472	-	sbp	b3917	0.62	-0.6
4,107,502	+	sbp	b3917	0.65	+0.1
4,107,562	+	sbp	b3917	0.71	+0.1
4,107,562	+	sbp	b3917	0.71	+0.6
4,107,574	-	sbp	b3917	0.72	-0.1
4,107,598	-	sbp	b3917	0.75	+0.5
4,107,693	-	sbp	b3917	0.84	-0.6
4,107,695	-	sbp	b3917	0.85	-0.1
4,107,695	-	sbp	b3917	0.85	-1.3
4,107,704	+	sbp	b3917	0.86	-0.3
4,107,712	-	sbp	b3917	0.86	+0.4
4,107,771	+				-0.7
4,107,831	+				-0.6
4,107,831	+				+0.6
4,107,840	+				-0.6
4,107,929	+				+0.1
4,108,052	+	cdh	b3918	0.13	-1.2
4,108,052	+	cdh	b3918	0.13	+0.3
4,108,058	-	cdh	b3918	0.14	+0.0
4,108,168	-	cdh	b3918	0.28	-0.4
4,108,170	-	cdh	b3918	0.29	-0.1
4,108,170	-	cdh	b3918	0.29	+1.4
4,108,172	+	cdh	b3918	0.29	+0.0
4,108,183	+	cdh	b3918	0.30	-0.4
4,108,200	+	cdh	b3918	0.33	+1.4
4,108,200	+	cdh	b3918	0.33	-0.4
4,108,202	-	cdh	b3918	0.33	-0.2
4,108,251	+	cdh	b3918	0.39	+0.1
4,108,307	+	cdh	b3918	0.47	+0.3
4,108,307	+	cdh	b3918	0.47	-1.0
4,108,342	-	cdh	b3918	0.51	-0.5
4,108,386	-	cdh	b3918	0.57	-0.1
4,108,391	-	cdh	b3918	0.58	+1.0
4,108,417	-	cdh	b3918	0.61	+0.5
4,108,417	-	cdh	b3918	0.61	+0.1
4,108,532	-	cdh	b3918	0.77	+0.2
4,108,568	-	cdh	b3918	0.81	-0.3
4,108,568	-	cdh	b3918	0.81	+0.7
4,108,576	-	cdh	b3918	0.82	-0.3
4,108,579	+	cdh	b3918	0.83	-1.0
4,108,579	+	cdh	b3918	0.83	+1.0
4,108,601	-	cdh	b3918	0.86	+0.3
4,108,651	+				-0.2
4,109,521	-				-0.8
4,109,552	-				-1.5
4,109,575	-				+0.5
4,109,575	-				+0.0
4,109,671	+				+0.1
4,109,675	+				+0.4
4,109,675	+				+0.0