Strain Fitness in Escherichia coli BW25113 around b2814
Experiment: Ying_AminoAcid20 rep A; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_AminoAcid20 rep A; time point 2 |
---|---|---|---|---|---|
remove | |||||
2,944,433 | + | mltA | b2813 | 0.30 | -0.5 |
2,944,433 | + | mltA | b2813 | 0.30 | -1.4 |
2,944,455 | + | mltA | b2813 | 0.32 | +1.0 |
2,944,485 | - | mltA | b2813 | 0.35 | -0.1 |
2,944,485 | - | mltA | b2813 | 0.35 | -0.3 |
2,944,553 | + | mltA | b2813 | 0.41 | +0.3 |
2,944,553 | + | mltA | b2813 | 0.41 | -0.1 |
2,944,561 | - | mltA | b2813 | 0.42 | +0.2 |
2,944,564 | + | mltA | b2813 | 0.42 | +0.0 |
2,944,566 | - | mltA | b2813 | 0.42 | -0.0 |
2,944,569 | + | mltA | b2813 | 0.42 | +0.1 |
2,944,652 | + | mltA | b2813 | 0.50 | -0.1 |
2,944,736 | - | mltA | b2813 | 0.58 | -0.1 |
2,944,860 | + | mltA | b2813 | 0.69 | -0.2 |
2,944,860 | + | mltA | b2813 | 0.69 | +0.4 |
2,944,883 | - | mltA | b2813 | 0.71 | -0.2 |
2,944,883 | - | mltA | b2813 | 0.71 | -0.4 |
2,944,943 | + | mltA | b2813 | 0.77 | +0.2 |
2,944,943 | + | mltA | b2813 | 0.77 | +0.5 |
2,944,943 | + | mltA | b2813 | 0.77 | +0.7 |
2,945,034 | + | mltA | b2813 | 0.85 | +0.1 |
2,945,034 | + | mltA | b2813 | 0.85 | +0.4 |
2,945,094 | - | -0.4 | |||
2,945,105 | + | +0.5 | |||
2,945,105 | + | -1.2 | |||
2,945,124 | + | +0.4 | |||
2,945,184 | + | -0.1 | |||
2,945,272 | + | -0.0 | |||
2,945,423 | + | metZ | b2814 | 0.18 | +0.4 |
2,945,508 | - | -1.0 | |||
2,946,029 | + | b2817 | b2817 | 0.20 | +0.0 |
2,946,029 | + | b2817 | b2817 | 0.20 | +0.6 |
2,946,068 | - | b2817 | b2817 | 0.23 | -0.4 |
2,946,068 | - | b2817 | b2817 | 0.23 | -0.8 |
2,946,086 | + | b2817 | b2817 | 0.24 | +0.7 |
2,946,094 | + | b2817 | b2817 | 0.25 | +0.4 |
2,946,164 | + | b2817 | b2817 | 0.31 | -0.7 |
2,946,172 | - | b2817 | b2817 | 0.31 | +0.1 |
2,946,213 | + | b2817 | b2817 | 0.35 | -0.0 |
2,946,223 | + | b2817 | b2817 | 0.35 | +1.1 |
2,946,223 | + | b2817 | b2817 | 0.35 | +1.1 |
2,946,267 | + | b2817 | b2817 | 0.39 | +0.0 |
2,946,309 | + | b2817 | b2817 | 0.42 | -0.1 |
2,946,334 | - | b2817 | b2817 | 0.44 | -0.3 |
Or see this region's nucleotide sequence