Strain Fitness in Escherichia coli BW25113 around b4418

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,144,867	+	rluC	b1086	0.73	-0.2
1,144,867	+	rluC	b1086	0.73	+0.3
1,144,899	+	rluC	b1086	0.77	+0.9
1,144,988	+	rluC	b1086	0.86	+0.2
1,144,988	+	rluC	b1086	0.86	+0.3
1,144,998	+	rluC	b1086	0.87	+1.3
1,144,998	+	rluC	b1086	0.87	+0.1
1,145,011	-	rluC	b1086	0.88	+0.1
1,145,011	-	rluC	b1086	0.88	-1.6
1,145,035	+				-0.0
1,145,058	-				-0.6
1,145,145	-				-0.4
1,145,279	-				-0.1
1,145,381	+	yceF	b1087	0.25	-0.5
1,145,381	+	yceF	b1087	0.25	+0.0
1,145,381	+	yceF	b1087	0.25	+0.0
1,145,381	+	yceF	b1087	0.25	-0.0
1,145,389	-	yceF	b1087	0.26	+0.0
1,145,389	-	yceF	b1087	0.26	-0.7
1,145,389	-	yceF	b1087	0.26	-0.4
1,145,395	+	yceF	b1087	0.28	+0.7
1,145,511	-	yceF	b1087	0.47	-0.2
1,145,516	-	yceF	b1087	0.48	-0.3
1,145,516	-	yceF	b1087	0.48	-0.2
1,145,576	-	yceF	b1087	0.58	+0.1
1,145,610	-	yceF	b1087	0.64	+0.4
1,145,614	-	yceF	b1087	0.65	-0.6
1,145,673	-	yceF	b1087	0.75	+0.0
1,145,724	-	yceF	b1087	0.84	+0.1
1,145,734	-	yceF	b1087	0.85	-0.3
1,145,734	-	yceF	b1087	0.85	-0.7
1,145,841	+	sraB	b4418	0.17	+0.4
1,145,847	-	sraB	b4418	0.21	+0.7
1,146,042	+				-0.6
1,146,052	+				+1.2
1,146,096	+	yceD	b1088	0.15	+0.7
1,146,096	+	yceD	b1088	0.15	-0.7
1,146,117	+	yceD	b1088	0.19	+1.3
1,146,265	+	yceD	b1088	0.48	-1.4
1,146,265	+	yceD	b1088	0.48	-0.5
1,146,265	+	yceD	b1088	0.48	-0.6
1,146,265	+	yceD	b1088	0.48	-0.2
1,146,277	+	yceD	b1088	0.50	+0.2
1,146,277	+	yceD	b1088	0.50	-0.5
1,146,310	+	yceD	b1088	0.56	+0.1
1,146,373	+	yceD	b1088	0.68	-1.0
1,146,373	+	yceD	b1088	0.68	-1.3