Strain Fitness in Escherichia coli BW25113 around b4490

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,079,650	+	putP	b1015	0.74	-0.7
1,079,750	-	putP	b1015	0.81	+0.6
1,079,750	-	putP	b1015	0.81	-1.0
1,079,770	+	putP	b1015	0.82	-0.9
1,079,770	+	putP	b1015	0.82	-0.4
1,079,773	-	putP	b1015	0.83	-2.0
1,079,783	-	putP	b1015	0.83	-0.3
1,079,873	+	putP	b1015	0.89	-2.2
1,079,881	-	putP	b1015	0.90	-1.4
1,079,940	+				-0.5
1,079,940	+				-0.5
1,079,943	+				-2.0
1,079,943	+				-1.3
1,080,086	+				+0.1
1,080,086	+				+0.2
1,080,094	-				-0.7
1,080,094	-				-0.6
1,080,229	-				+0.1
1,080,595	+				-0.5
1,080,684	-	efeU	b4490	0.13	-0.7
1,080,696	-	efeU	b4490	0.14	-0.1
1,080,701	-	efeU	b4490	0.15	-1.1
1,080,787	+	efeU	b4490	0.25	+0.1
1,080,823	-	efeU	b4490	0.29	-0.0
1,080,823	-	efeU	b4490	0.29	+0.3
1,080,898	-	efeU	b4490	0.38	+0.5
1,080,907	+	efeU	b4490	0.40	-1.2
1,080,924	+	efeU	b4490	0.42	-0.8
1,080,924	+	efeU	b4490	0.42	+0.4
1,080,957	+	efeU	b4490	0.46	+0.0
1,081,013	+	efeU	b4490	0.52	+0.4
1,081,047	+	efeU	b4490	0.56	-0.1
1,081,081	+	efeU	b4490	0.60	-0.1
1,081,246	-	efeU	b4490	0.80	+0.3
1,081,246	-	efeU	b4490	0.80	-0.2
1,081,251	-	efeU	b4490	0.81	-0.3
1,081,269	-	efeU	b4490	0.83	+0.4
1,081,269	-	efeU	b4490	0.83	+0.7
1,081,377	-				+0.3
1,081,542	-				-0.0
1,081,577	+				+0.6
1,081,663	+	ycdO	b1018	0.17	-0.4
1,081,663	+	ycdO	b1018	0.17	-0.7
1,081,663	-	ycdO	b1018	0.17	+1.2
1,081,663	-	ycdO	b1018	0.17	-1.3
1,081,678	-	ycdO	b1018	0.19	+0.0
1,081,852	+	ycdO	b1018	0.34	+0.2
1,081,852	+	ycdO	b1018	0.34	+0.0
1,081,908	+	ycdO	b1018	0.39	+0.5
1,081,944	+	ycdO	b1018	0.42	+0.0
1,081,979	+	ycdO	b1018	0.45	-0.1
1,082,039	+	ycdO	b1018	0.51	+0.0
1,082,039	+	ycdO	b1018	0.51	-0.4
1,082,156	-	ycdO	b1018	0.61	+0.4
1,082,179	+	ycdO	b1018	0.63	+0.1
1,082,192	-	ycdO	b1018	0.64	+0.1
1,082,382	+	ycdO	b1018	0.81	-0.3
1,082,392	+	ycdO	b1018	0.82	+0.3