Strain Fitness in Escherichia coli BW25113 around b4171

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
4,396,326	-	mutL	b4170	0.48	-0.6
4,396,329	-	mutL	b4170	0.48	-0.0
4,396,407	+	mutL	b4170	0.53	-0.3
4,396,415	+	mutL	b4170	0.53	+0.1
4,396,415	-	mutL	b4170	0.53	+0.2
4,396,432	-	mutL	b4170	0.54	-0.4
4,396,435	-	mutL	b4170	0.54	-0.5
4,396,435	-	mutL	b4170	0.54	+0.3
4,396,466	-	mutL	b4170	0.56	+0.3
4,396,546	+	mutL	b4170	0.60	+0.1
4,396,551	+	mutL	b4170	0.60	-0.3
4,396,556	+	mutL	b4170	0.61	+0.1
4,396,556	+	mutL	b4170	0.61	-1.1
4,396,556	+	mutL	b4170	0.61	+0.1
4,396,778	+	mutL	b4170	0.73	+0.2
4,396,991	+	mutL	b4170	0.84	-1.7
4,396,991	+	mutL	b4170	0.84	-0.7
4,396,991	+	mutL	b4170	0.84	+0.0
4,396,999	-	mutL	b4170	0.85	+0.5
4,396,999	-	mutL	b4170	0.85	-0.1
4,396,999	-	mutL	b4170	0.85	-0.4
4,396,999	-	mutL	b4170	0.85	+0.7
4,397,012	+	mutL	b4170	0.85	-0.1
4,397,162	+				-1.0
4,397,162	+				-0.9
4,397,162	+				-0.1
4,397,162	+				+0.1
4,397,170	-				+0.4
4,397,195	-				-0.4
4,397,195	-				-0.6
4,397,244	+				-2.3
4,397,244	+				-1.9
4,397,420	+	miaA	b4171	0.15	+1.3
4,397,449	+	miaA	b4171	0.18	+1.7
4,397,449	+	miaA	b4171	0.18	+0.7
4,397,455	+	miaA	b4171	0.19	-0.0
4,397,458	-	miaA	b4171	0.19	-0.1
4,397,505	+	miaA	b4171	0.24	-0.9
4,397,549	-	miaA	b4171	0.29	+1.4
4,397,584	+	miaA	b4171	0.32	+0.8
4,397,589	-	miaA	b4171	0.33	+1.7
4,397,704	-	miaA	b4171	0.45	+1.3
4,397,763	-	miaA	b4171	0.51	+1.1
4,397,845	-	miaA	b4171	0.60	-0.3
4,397,853	+	miaA	b4171	0.61	-0.4
4,397,856	+	miaA	b4171	0.61	+1.9
4,397,866	+	miaA	b4171	0.62	+0.5
4,397,922	+	miaA	b4171	0.68	+0.1
4,397,935	+	miaA	b4171	0.69	+1.1
4,397,935	+	miaA	b4171	0.69	-0.2
4,398,137	+				+0.1
4,398,137	+				-0.5
4,398,156	+				-0.2
4,398,233	+				-0.8
4,398,233	+				-2.0
4,398,433	+	hfq	b4172	0.39	+2.7
4,398,562	+	hfq	b4172	0.81	-0.1
4,398,565	+	hfq	b4172	0.82	-0.4
4,398,593	+				+0.5
4,398,668	-				-0.1
4,398,675	-				+0.7
4,398,677	+				+0.1
4,398,677	+				+0.1
4,398,703	+				-0.3
4,398,714	+				-0.9
4,398,724	-				+0.5
4,398,728	+				-0.6
4,398,728	+				+0.1
4,398,793	+				+0.7
4,398,815	-				+0.6
4,398,815	-				-0.0
4,398,837	+	hflX	b4173	0.11	+0.3
4,398,926	-	hflX	b4173	0.18	-0.9
4,398,961	+	hflX	b4173	0.21	-0.2
4,398,961	+	hflX	b4173	0.21	-2.0
4,398,965	+	hflX	b4173	0.21	+1.0
4,398,965	+	hflX	b4173	0.21	+0.3
4,398,968	-	hflX	b4173	0.21	-1.3
4,398,983	-	hflX	b4173	0.22	-0.9
4,398,983	-	hflX	b4173	0.22	-1.1
4,398,992	-	hflX	b4173	0.23	+0.1
4,399,118	+	hflX	b4173	0.33	-0.2
4,399,140	+	hflX	b4173	0.35	-0.6
4,399,154	+	hflX	b4173	0.36	-0.5
4,399,217	-	hflX	b4173	0.41	+0.1