Strain Fitness in Escherichia coli BW25113 around b3991

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
4,188,899	-	thiH	b3990	0.12	+0.1
4,189,035	-	thiH	b3990	0.24	+0.1
4,189,048	+	thiH	b3990	0.26	-0.3
4,189,056	-	thiH	b3990	0.26	+0.3
4,189,073	-	thiH	b3990	0.28	+0.5
4,189,133	-	thiH	b3990	0.33	+0.1
4,189,334	-	thiH	b3990	0.51	-0.9
4,189,351	-	thiH	b3990	0.52	+0.3
4,189,351	-	thiH	b3990	0.52	+0.5
4,189,362	-	thiH	b3990	0.53	+0.3
4,189,372	-	thiH	b3990	0.54	+0.1
4,189,372	-	thiH	b3990	0.54	-0.6
4,189,429	+	thiH	b3990	0.59	-0.5
4,189,429	-	thiH	b3990	0.59	+0.6
4,189,429	-	thiH	b3990	0.59	-0.2
4,189,495	+	thiH	b3990	0.65	-0.3
4,189,506	+	thiH	b3990	0.66	+0.7
4,189,508	+	thiH	b3990	0.66	+0.2
4,189,543	-	thiH	b3990	0.69	+0.0
4,189,543	-	thiH	b3990	0.69	-0.1
4,189,724	+	thiH	b3990	0.85	+0.3
4,189,737	-	thiH	b3990	0.86	+1.0
4,189,737	-	thiH	b3990	0.86	+1.1
4,189,759	-	thiH	b3990	0.88	+0.5
4,189,759	-	thiH	b3990	0.88	+0.3
4,190,005	-	thiG	b3991	0.15	+0.2
4,190,005	-	thiG	b3991	0.15	+0.0
4,190,187	-	thiG	b3991	0.39	-0.1
4,190,187	-	thiG	b3991	0.39	-0.7
4,190,253	+	thiG	b3991	0.47	-0.1
4,190,267	-	thiG	b3991	0.49	+0.3
4,190,267	-	thiG	b3991	0.49	+0.5
4,190,270	+	thiG	b3991	0.50	+0.8
4,190,270	+	thiG	b3991	0.50	-0.5
4,190,278	-	thiG	b3991	0.51	+0.1
4,190,278	-	thiG	b3991	0.51	+0.2
4,190,287	-	thiG	b3991	0.52	-0.3
4,190,306	-	thiG	b3991	0.54	+0.6
4,190,306	-	thiG	b3991	0.54	-0.0
4,190,404	+	thiG	b3991	0.67	-1.3
4,190,412	-	thiG	b3991	0.68	-0.1
4,190,528	-	thiG	b3991	0.83	+0.1
4,190,579	+	thiG	b3991	0.90	+0.1
4,190,581	+	thiG	b3991	0.90	+0.3
4,190,581	+	thiG	b3991	0.90	-0.2
4,190,584	-				-0.3
4,190,586	-				+0.2
4,190,791	+	thiS	b4407	0.65	-0.2
4,190,820	+	thiS	b4407	0.80	-0.4
4,190,830	+	thiS	b4407	0.85	-0.4
4,190,860	-				+0.4
4,190,908	-				-0.3
4,190,968	-	thiF	b3992	0.16	+0.1
4,190,968	-	thiF	b3992	0.16	-0.1
4,191,030	+	thiF	b3992	0.25	-0.1
4,191,121	+	thiF	b3992	0.37	+0.2
4,191,121	+	thiF	b3992	0.37	+0.2
4,191,129	-	thiF	b3992	0.38	-0.4
4,191,234	+	thiF	b3992	0.52	+0.7
4,191,236	-	thiF	b3992	0.52	+0.2
4,191,248	+	thiF	b3992	0.53	+1.2
4,191,269	+	thiF	b3992	0.56	+0.4
4,191,282	-	thiF	b3992	0.58	+0.9
4,191,310	-	thiF	b3992	0.62	+0.4
4,191,368	-	thiF	b3992	0.69	-0.0
4,191,376	+	thiF	b3992	0.70	+0.0
4,191,468	-	thiF	b3992	0.83	+0.5
4,191,475	-	thiF	b3992	0.83	+0.2
4,191,475	-	thiF	b3992	0.83	-0.6
4,191,483	-	thiF	b3992	0.85	+0.2
4,191,483	-	thiF	b3992	0.85	-0.2
4,191,489	+	thiF	b3992	0.85	-0.1
4,191,489	+	thiF	b3992	0.85	+1.8
4,191,489	+	thiF	b3992	0.85	-0.3
4,191,489	+	thiF	b3992	0.85	-0.1