Strain Fitness in Escherichia coli BW25113 around b2818

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,946,267	+	b2817	b2817	0.39	+0.0
2,946,309	+	b2817	b2817	0.42	-0.1
2,946,334	-	b2817	b2817	0.44	-0.3
2,946,542	+	b2817	b2817	0.61	-0.5
2,946,607	-	b2817	b2817	0.66	+0.1
2,946,610	-	b2817	b2817	0.66	+0.5
2,946,610	-	b2817	b2817	0.66	+0.3
2,946,857	-	b2817	b2817	0.86	+0.2
2,947,024	-				+0.0
2,947,032	+				+0.9
2,947,273	-				+0.5
2,947,422	+	argA	b2818	0.12	-0.3
2,947,436	+	argA	b2818	0.13	-0.2
2,947,442	-	argA	b2818	0.13	+0.3
2,947,514	-	argA	b2818	0.19	+0.1
2,947,514	-	argA	b2818	0.19	-0.9
2,947,517	+	argA	b2818	0.19	-0.7
2,947,517	+	argA	b2818	0.19	+0.5
2,947,584	-	argA	b2818	0.24	-0.6
2,947,584	-	argA	b2818	0.24	-0.4
2,947,611	+	argA	b2818	0.26	+0.2
2,947,621	+	argA	b2818	0.27	+0.4
2,947,631	-	argA	b2818	0.28	-0.1
2,947,748	+	argA	b2818	0.36	-0.4
2,947,766	+	argA	b2818	0.38	-0.4
2,947,782	-	argA	b2818	0.39	-0.5
2,947,782	-	argA	b2818	0.39	-0.7
2,947,783	+	argA	b2818	0.39	-0.5
2,948,091	+	argA	b2818	0.62	-0.4
2,948,357	+	argA	b2818	0.82	-0.2
2,948,415	-	argA	b2818	0.86	-0.1
2,948,474	+				+0.1
2,948,480	-				-0.1
2,948,485	+				+0.2
2,948,493	-				+0.1
2,948,557	-				+2.1
2,948,584	+				+0.6
2,948,592	-				-0.6
2,948,592	-				-1.5
2,948,630	-				+0.4
2,948,689	-				-0.3
2,948,698	+				-0.1
2,948,711	-				+0.1
2,948,975	+	recD	b2819	0.17	-0.6
2,948,983	-	recD	b2819	0.18	-0.3
2,948,985	+	recD	b2819	0.18	+0.4
2,948,988	-	recD	b2819	0.18	-0.8
2,949,122	+	recD	b2819	0.25	-0.2
2,949,124	+	recD	b2819	0.26	+0.8
2,949,124	+	recD	b2819	0.26	+0.6
2,949,159	+	recD	b2819	0.27	-0.3
2,949,159	+	recD	b2819	0.27	+0.7
2,949,559	-	recD	b2819	0.49	-0.3
2,949,564	-	recD	b2819	0.50	+0.6