Strain Fitness in Escherichia coli BW25113 around b2593

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,731,351	+	clpB	b2592	0.67	+0.2
2,731,448	-	clpB	b2592	0.71	-0.2
2,731,468	+	clpB	b2592	0.72	-0.2
2,731,476	-	clpB	b2592	0.72	+0.5
2,731,476	-	clpB	b2592	0.72	+0.1
2,731,481	-	clpB	b2592	0.72	+0.1
2,731,531	-	clpB	b2592	0.74	-0.3
2,731,575	-	clpB	b2592	0.76	-0.1
2,731,674	-	clpB	b2592	0.80	+0.4
2,731,730	+	clpB	b2592	0.82	+0.6
2,731,736	-	clpB	b2592	0.82	-0.7
2,731,746	-	clpB	b2592	0.83	+0.1
2,731,746	-	clpB	b2592	0.83	-0.7
2,731,857	-	clpB	b2592	0.87	-0.0
2,731,868	+	clpB	b2592	0.87	+0.5
2,731,919	+	clpB	b2592	0.89	+0.4
2,731,927	-	clpB	b2592	0.90	-0.4
2,731,965	-				-0.7
2,731,966	-				+0.6
2,731,966	-				+0.6
2,732,002	-				+0.2
2,732,140	-				+0.3
2,732,202	+	ryfD	b4609	0.19	-0.6
2,732,205	-	ryfD	b4609	0.21	+0.7
2,732,212	+	ryfD	b4609	0.26	+0.1
2,732,212	+	ryfD	b4609	0.26	+1.1
2,732,251	+	ryfD	b4609	0.53	+0.2
2,732,277	-	ryfD	b4609	0.71	-0.2
2,732,277	-	ryfD	b4609	0.71	-0.1
2,732,323	+				+0.2
2,732,323	+				-0.5
2,732,456	-	yfiH	b2593	0.18	+0.0
2,732,499	-	yfiH	b2593	0.24	-1.4
2,732,499	-	yfiH	b2593	0.24	-0.4
2,732,502	-	yfiH	b2593	0.24	-0.8
2,732,502	-	yfiH	b2593	0.24	+0.4
2,732,563	-	yfiH	b2593	0.33	+0.4
2,732,563	-	yfiH	b2593	0.33	+0.7
2,732,594	+	yfiH	b2593	0.37	+0.3
2,732,602	-	yfiH	b2593	0.38	+0.3
2,732,648	+	yfiH	b2593	0.44	-0.4
2,732,659	+	yfiH	b2593	0.46	+0.2
2,732,669	+	yfiH	b2593	0.47	+0.5
2,732,748	+	yfiH	b2593	0.58	-0.3
2,732,756	-	yfiH	b2593	0.59	-0.2
2,732,763	-	yfiH	b2593	0.60	+0.4
2,732,763	-	yfiH	b2593	0.60	+0.1
2,732,778	+	yfiH	b2593	0.62	+0.3
2,732,813	-	yfiH	b2593	0.67	+0.5
2,732,813	-	yfiH	b2593	0.67	-0.1
2,732,852	-	yfiH	b2593	0.72	+0.1
2,732,854	-	yfiH	b2593	0.72	+0.3
2,732,926	+	yfiH	b2593	0.82	+0.2
2,732,943	-	yfiH	b2593	0.84	+0.9
2,732,969	-	yfiH	b2593	0.88	+0.8
2,732,969	-	yfiH	b2593	0.88	+0.2
2,732,994	+				+0.3
2,733,052	+				+0.5
2,733,060	-				+0.2
2,733,062	-				-0.0
2,733,072	+				+0.5
2,733,079	-				-0.9
2,733,079	-				-1.2
2,734,040	-				-0.3
2,734,040	-				+0.1
2,734,042	-				+0.2