Strain Fitness in Escherichia coli BW25113 around b2584

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,717,016	-	trxC	b2582	0.62	-0.3
2,717,103	+	trxC	b2582	0.82	+1.0
2,717,387	-	yfiP	b2583	0.20	+0.5
2,717,387	-	yfiP	b2583	0.20	+0.6
2,717,445	+	yfiP	b2583	0.29	+0.8
2,717,445	+	yfiP	b2583	0.29	-0.4
2,717,458	-	yfiP	b2583	0.30	-0.2
2,717,591	-	yfiP	b2583	0.49	-0.1
2,717,591	-	yfiP	b2583	0.49	+0.2
2,717,605	+	yfiP	b2583	0.52	-0.3
2,717,612	+	yfiP	b2583	0.53	+0.6
2,717,612	+	yfiP	b2583	0.53	-0.7
2,717,767	-	yfiP	b2583	0.75	-0.2
2,717,817	-	yfiP	b2583	0.82	-0.1
2,717,846	+	yfiP	b2583	0.86	-0.7
2,717,846	+	yfiP	b2583	0.86	-0.8
2,717,854	-	yfiP	b2583	0.87	+0.1
2,717,902	+				-0.1
2,717,902	+				-0.0
2,717,979	-				-0.6
2,718,064	-				-3.0
2,718,151	-				-2.5
2,718,151	-				-1.3
2,718,309	+	yfiQ	b2584	0.13	-2.5
2,718,337	-	yfiQ	b2584	0.14	-3.0
2,718,461	+	yfiQ	b2584	0.18	-1.6
2,718,469	-	yfiQ	b2584	0.19	-2.0
2,718,471	+	yfiQ	b2584	0.19	-2.1
2,718,481	+	yfiQ	b2584	0.19	-2.0
2,718,534	+	yfiQ	b2584	0.21	-2.8
2,718,534	+	yfiQ	b2584	0.21	-0.7
2,718,597	-	yfiQ	b2584	0.23	-2.4
2,718,681	+	yfiQ	b2584	0.27	-1.9
2,718,773	+	yfiQ	b2584	0.30	-0.5
2,718,981	+	yfiQ	b2584	0.38	-1.4
2,719,004	-	yfiQ	b2584	0.39	-0.8
2,719,034	-	yfiQ	b2584	0.40	-1.8
2,719,034	-	yfiQ	b2584	0.40	-2.4
2,719,034	-	yfiQ	b2584	0.40	-1.7
2,719,043	+	yfiQ	b2584	0.40	-2.7
2,719,090	+	yfiQ	b2584	0.42	-2.7
2,719,155	-	yfiQ	b2584	0.44	-1.4
2,719,183	-	yfiQ	b2584	0.45	-2.5
2,719,209	-	yfiQ	b2584	0.46	-0.3
2,719,209	-	yfiQ	b2584	0.46	-1.2
2,719,220	+	yfiQ	b2584	0.47	-2.9
2,719,228	-	yfiQ	b2584	0.47	-1.6
2,719,241	+	yfiQ	b2584	0.48	-2.6
2,719,246	+	yfiQ	b2584	0.48	-1.4
2,719,246	+	yfiQ	b2584	0.48	-1.8
2,719,339	+	yfiQ	b2584	0.51	-2.0
2,719,355	-	yfiQ	b2584	0.52	-2.7
2,719,355	-	yfiQ	b2584	0.52	-2.5
2,719,404	+				+1.3
2,719,474	-	yfiQ	b2584	0.56	-1.1
2,719,510	-	yfiQ	b2584	0.58	-1.9
2,719,662	+	yfiQ	b2584	0.63	-3.7
2,719,662	+	yfiQ	b2584	0.63	-1.4
2,719,669	+	yfiQ	b2584	0.64	-1.6
2,719,669	+	yfiQ	b2584	0.64	-1.0
2,719,696	+	yfiQ	b2584	0.65	-1.9
2,719,696	+	yfiQ	b2584	0.65	-1.4
2,719,747	-	yfiQ	b2584	0.67	-1.3
2,719,747	-	yfiQ	b2584	0.67	-1.5
2,719,852	-	yfiQ	b2584	0.71	-2.8
2,719,931	-	yfiQ	b2584	0.74	-3.0
2,720,013	+	yfiQ	b2584	0.77	-1.7
2,720,013	+	yfiQ	b2584	0.77	-1.3
2,720,093	-	yfiQ	b2584	0.80	-2.2
2,720,105	-	yfiQ	b2584	0.80	-1.0
2,720,235	-	yfiQ	b2584	0.85	-2.5
2,720,288	-	yfiQ	b2584	0.87	-1.9
2,720,288	-	yfiQ	b2584	0.87	-3.7
2,720,368	+	yfiQ	b2584	0.90	-0.9
2,720,434	-				-3.6
2,720,438	+				-1.5
2,720,440	-				-1.8
2,720,440	-				-2.4
2,720,545	+				-1.3
2,720,545	+				-0.7
2,720,642	-				-0.4
2,721,348	+	pssA	b2585	0.44	+1.5