Strain Fitness in Escherichia coli BW25113 around b2500

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,619,262	+				-5.5
2,619,284	+				-5.1
2,619,362	+	purM	b2499	0.14	-5.2
2,619,501	-	purM	b2499	0.27	-5.6
2,619,662	+	purM	b2499	0.43	-2.3
2,619,662	+	purM	b2499	0.43	-3.9
2,619,832	+	purM	b2499	0.59	-4.0
2,619,832	+	purM	b2499	0.59	-3.0
2,619,835	-	purM	b2499	0.59	-3.5
2,619,923	-	purM	b2499	0.68	-3.6
2,619,923	-	purM	b2499	0.68	-3.1
2,619,971	-	purM	b2499	0.72	-4.5
2,620,035	+	purM	b2499	0.79	-3.4
2,620,035	+	purM	b2499	0.79	-3.8
2,620,043	-	purM	b2499	0.79	-3.2
2,620,164	+				-3.7
2,620,164	+				-2.2
2,620,164	+				-3.6
2,620,175	+				-3.2
2,620,258	+				+0.1
2,620,258	+				+0.7
2,620,260	+				-3.3
2,620,422	-	purN	b2500	0.26	-4.0
2,620,451	+	purN	b2500	0.31	-0.7
2,620,459	-	purN	b2500	0.32	-2.6
2,620,470	-	purN	b2500	0.33	-3.6
2,620,604	+	purN	b2500	0.54	-4.3
2,620,651	+	purN	b2500	0.62	-2.5
2,620,651	+	purN	b2500	0.62	-4.3
2,620,661	-	purN	b2500	0.63	-4.7
2,620,744	+	purN	b2500	0.76	-3.9
2,620,873	+				+0.2
2,620,873	+				-0.1
2,620,899	-				+0.1
2,620,981	+				+1.1
2,620,981	+				-0.3
2,620,989	-				-0.1
2,620,989	-				-0.0
2,620,998	-				-0.3
2,621,024	-				-0.6
2,621,032	-				-0.2
2,621,041	-				+0.2
2,621,118	-				-0.9
2,621,325	-	ppk	b2501	0.13	-1.8
2,621,325	-	ppk	b2501	0.13	-0.5
2,621,444	+	ppk	b2501	0.18	-1.7
2,621,452	+	ppk	b2501	0.19	-2.5
2,621,521	+	ppk	b2501	0.22	-1.5
2,621,521	+	ppk	b2501	0.22	-2.5
2,621,586	-	ppk	b2501	0.25	-2.4
2,621,692	-	ppk	b2501	0.30	-1.2
2,621,786	-	ppk	b2501	0.35	-1.6
2,621,786	-	ppk	b2501	0.35	-0.9
2,621,808	+	ppk	b2501	0.36	-1.7
2,621,840	-	ppk	b2501	0.37	-1.3
2,621,840	-	ppk	b2501	0.37	-2.6
2,621,850	+	ppk	b2501	0.38	-1.1
2,621,850	+	ppk	b2501	0.38	-2.3
2,621,869	+	ppk	b2501	0.39	-0.5
2,621,869	+	ppk	b2501	0.39	-0.1